Echinops telfairi (small Madagascar hedgehog): 101646572
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Entry
101646572 CDS
T08707
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
101646572 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101646572 (SCN2A)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101646572 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
HB_ELP1
RskA_C
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
101646572
NCBI-ProteinID:
XP_045153955
LinkDB
All DBs
Position
Unknown
AA seq
1953 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPGMVSEPLEDLDPFYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
VAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENSTFEINMTSLFNASL
DMNGTIINRTGMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAVAAASTESREFSGAGGM
GVFSESSSVASKLSSKSEKDMKNRRKKKKQKEQSGEEDKEERFRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRARDIGSENDFADDEHST
FEDNDSRRDSLFVPRRHGERRHSTVSQASRASRVPPVLPLNGKMHSAVDCNGVVSLVGGP
STLTSPTGQLLPERCYRIAPVELVFRLNHYEKLEESRQKCPPCWYKFANMCLIWDCCKPW
LKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAE
MFLKVIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISSDCELPRWHM
SDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSS
FSSDNLAATDDDNEMNNLQIAVGRMQRGIDYVKRKLREIIQKAFVRKQKALDEIKPLEDL
NNKKDSCVSNHTTVEISKDLNYLKDGNGTTSGIGSSVEKYVVDESDYMSFINNPSLTVTV
PIAVGESDFENLNTEEFSSESDMEESKESDFYFPLLITSILDCVRKFKCCQISIEEGKGK
LWWNLRKTCYKIVEHNWFETCIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYI
FILEMLLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALR
PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTG
EMFDISVVNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAV
DSRNVELQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTE
EQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVET
DDQSQEMTNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLA
ELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCD
PDKVHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSE
DDFEMFYEVWEKFDPDATQFIEFVKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRI
HCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVI
QRAYRRYLLKQKIKKVSSIYKKDKGKEGEGTPIKEEILNEKLNENSTPEKTDMTPSTTSP
PSYDSVTKPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttcttcaccagggaa
tcccttgctgctattgagcaacgaattgcagaggagaaagctaagagacccaagcaagag
cgcaaggatgaagatgacgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttacggagacattcccccagggatggtgtcggaacccctggaggac
ctggatccattctatatcaataagaaaacatttatagtattgaacaaaggaaaagcaatc
tctcggttcagtgccacctccgccttgtacattttaacacccttcaaccctattagaaaa
gtagctattaagattttggtacattctttattcaatgtgcttattatgtgcacaattctg
accaactgtgtatttatgactatgagtaaccctcctgactggacgaagaatgtggagtat
acatttacaggaatttatacttttgaatcacttataaaaatacttgcaagaggcttttgt
ttagaagacttcacattcctgcgggatccctggaattggttggacttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcattgaaaacaatttcagtcattccaggcctgaagaccattgtgggggcc
ctgatccagtcggtgaagaagctctcagatgtcatgatcctgactgtgttctgtctgagt
gtctttgccctgataggactccagctcttcatgggcaacctgaggaataaatgtctacag
tggccgccagagaattctacctttgaaatcaacatgacttccttatttaatgcttcactg
gatatgaatggtaccattatcaacagaacagggatgtttaactgggatgaatatattgaa
gataaaagtcatttttattttctggaagggcaaaatgatgctctgctttgtggcaacagc
tcagatgcaggccagtgtccagaaggttacatctgtgtgaaggctggtaggaaccctaac
tatggttacacaagctttgacaccttcagttgggccttcttatccttatttcgactcatg
actcaagatttctgggaaaacctttatcaactgacactgcgcgctgctgggaaaacatac
atgatattttttgtgctggtcattttcttgggctcattttacctaataaatttaatattg
gctgttgtagccatggcctatgaagaacagaaccaggcaacactcgaagaggcagaacag
aaagaagctgaatttcagcaaatgcttgaacagttaaaaaagcaacaagaagaagctcag
gcagcagcggtggcagcggcttccacggaatccagagagttcagtggagctggtgggatg
ggcgttttctcagagagctcttcagtagcatccaagctgagctccaagagtgagaaggac
atgaaaaacagaaggaaaaagaagaaacagaaggaacaatcgggagaagaagacaaggaa
gagcgcttccgcaaatcggaatcggaagacagcatacggagaaaagggttccgcttttcc
ttagaaggcagcaggctgacttatgaaaagaggttttcttctccacaccagtctttgttg
agcatccgtggctcccttttctctccaagacgcaacagccgagcaagccttttcagtttc
agaggtcgggcaagggacattggctctgagaacgacttcgccgacgatgagcacagcacc
tttgaggacaacgacagccgccgggactccctgtttgtgccccgcagacacggggagcgg
cgccacagcaccgtcagccaggccagccgcgcctcccgggtgccccctgtgctgcccttg
aacgggaagatgcacagcgccgtggactgcaatggtgtggtctccctggtggggggcccg
tccaccctcacctcgcccaccggacagctcctgccagagcggtgctatagaatagcacca
gtagaactggttttccggctaaatcattatgaaaaacttgaagaatccagacagaaatgt
ccaccctgctggtataaatttgctaacatgtgtttgatctgggactgctgtaaaccatgg
ttaaaggtgaagcacattgtcaacctggtcgtgatggatccgtttgtggacttggccatc
accatctgcatcgtcttaaacacgctcttcatggccatggagcactaccccatgacggag
cagttcagcagtgtgttatctgtcgggaacctggtcttcactgggatcttcacggcagaa
atgtttctcaaagtcattgccatggacccttactattatttccaagaaggctggaatatt
ttcgatggttttattgtgagcctcagtttaatggaattgggtttggcgaatgtggaagga
ttgtcagttctccgatcattccggctgctccgagttttcaagctggcaaaatcctggccc
acactgaacatgctgataaagatcattggtaactcagtgggggctctgggtaacctcacc
ttggtcttggccatcatcgtcttcatttttgccgtggtcggcatgcagctctttgggaag
agctacaaagattgtgtctgcaagatctccagcgactgtgagctcccccgctggcacatg
tctgacttcttccactccttcctgatcgtgttccgagtgctgtgtggggagtggatagag
accatgtgggactgtatggaggtcgctggccaaaccatgtgccttactgtcttcatgatg
gtcatggtcatcgggaacctagtggtcctgaacctcttcctggccttactcttgagttca
tttagttctgacaatcttgctgccacggatgatgataatgaaatgaacaatctccagatt
gctgtggggagaatgcagagaggaatagattatgtgaaaagaaaactccgtgaaatcatt
cagaaagcctttgttagaaagcagaaggctttagacgaaattaaacctcttgaagatcta
aataacaaaaaagacagctgtgtctctaatcataccacagtggaaataagcaaagacctc
aattatctcaaagatggaaatggaaccaccagtggcataggcagtagtgtagaaaagtat
gttgtggatgaaagtgactacatgtcattcataaacaaccccagtctcacggtgactgta
ccaattgcagttggagaatctgactttgaaaatttaaatactgaagaattcagtagtgag
tcagatatggaagaaagcaaagagagtgatttttattttcctttactgatcacatctatt
ttagactgtgtacggaagttcaagtgctgtcagataagcatagaagaaggcaaagggaaa
ctctggtggaacctgagaaaaacgtgctacaaaatcgtggagcacaactggtttgaaacc
tgcattgtcttcatgatcctcctcagcagtggggcactggcctttgaagacatatatatt
gaacagcgaaagaccattaaaacgatgttagaatatgccgacaaggttttcacctacata
ttcattctggaaatgcttctaaagtgggtggcgtatggctttcaaatgtattttaccaat
gcgtggtgctggctagacttcctgattgtagatgtttcattggttagcttaacagcaaac
gctttggggtactcggaacttggtgccatcaagtccctgcggacgctccgagccctgcgg
ccactccgagccttatcgcggtttgaaggaatgcgggtggttgtaaatgcgcttttagga
gccattccatccataatgaatgtactcctggtgtgtctaatcttttggctaatattcagt
atcatgggcgtgaacctctttgctggtaaattttaccactgtatcaactacaccactgga
gagatgtttgatataagcgttgtcaacaactacagtgagtgtaaagcccttatagagagc
aatcagactgccaggtggaaaaacgtcaaagtaaattttgataatgtgggacttggatat
ctttctctgcttcaagtagccacatttaaaggatggatggatatcatgtatgcagctgta
gactctcgaaatgtagaactgcagcccaagtatgaagacaatctgtacatgtacctttat
tttgtcatctttatcatttttggttcattctttactctgaatctcttcattggggtcatc
atagataacttcaaccaacaaaaaaagaagtttggaggtcaagacatttttatgacagaa
gagcagaagaaatactacaatgcaatgaaaaaactcggttcaaagaaaccgcaaaagccc
atacctagacctgctaacaaattccaaggaatggtctttgatttcgtaaccaaacaagtc
tttgatatcagcatcatgatcctcatctgcctcaacatggtcaccatgatggtggaaaca
gatgaccagagtcaagaaatgaccaacattttatattggattaatctggtgtttattgtt
ttgttcactggagaatgtgtgctgaagctcatctctcttcgttattactatttcactatt
gggtggaatatttttgactttgtggtggtcattctctccattgtaggtatgtttctggct
gagcttatagaaaagtactttgtgtcccctaccctgttccgagtgatccgccttgccagg
atcggccgaatcctgcgtctgatcaaaggggccaaggggatccgcaccttgctcttcgct
ttgatgatgtcccttcccgcgctgtttaacatcggcctcctgctcttcctggtcatgttc
atctacgccatctttgggatgtccaactttgcctatgttaagagggaagttggaattgat
gacatgttcaacttcgagaccttcggcaacagcatgatctgcctcttccaaatcaccacc
tctgctggctgggatggcttgctggcacccatcctgaatagtgggcctcctgactgtgac
cctgataaggttcaccctgggagctcagtgaagggagactgcggcaacccatcggtgggg
attttcttcttcgtcagctacatcatcatctccttcctggtggtggtgaacatgtacatc
gctgtcatcctggagaacttcagcgtggccacggaggagagtgcagagcccctgagcgag
gacgacttcgagatgttctacgaggtttgggagaagtttgatcctgacgccacccagttt
atcgagtttgtcaaactctcagattttgctgctgccctggacccgcctcttctcatcgcc
aaacccaacaaagtccagctcatcgccatggacctgcccatggtcagcggggaccggatc
cactgcctcgacatcctgtttgccttcacaaagcgggttctgggggagagcggggagatg
gatgcccttcggatacagatggaagagcgattcatggcatcgaatccctccaaagtctcc
tacgagcccatcaccaccactctgaaacggaaacaagaggaggtgtccgccatcgtgatc
cagagggcttatagacgctacctcttgaagcagaaaattaaaaaggtttcaagtatatat
aagaaagacaaaggcaaggaaggcgagggaacgccaatcaaagaagaaatcctcaatgaa
aaactcaatgagaattccactccggagaaaaccgatatgacaccttccaccacgtcgccg
ccctcctatgacagtgtgaccaagccggaaaaagaaaaatttgaaaaggacaaatccgaa
aaggaagacaaagggaaagatatcagggaaagcaaaaaataa
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integrated database retrieval system
