Empidonax traillii (willow flycatcher): 114056393
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Entry
114056393 CDS
T05887
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
etl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114056393 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114056393 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114056393 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
etl00535
]
114056393 (COL9A3)
Proteoglycans [BR:
etl00535
]
Extracellular matrix (ECM) proteoglycans
Others
114056393 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114056393
NCBI-ProteinID:
XP_027737362
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search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NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctggattctccactcttgggctcctctccctgtgtcagtttttggccacagcatca
gctcagtcccttcagagagtaggaccacaaggccctcctggaccacgaggaccccctgga
ccgtctggcaaggatggcattgatggagaacctggccctcctggcttgccaggcccgcca
gggccaaaaggtgcaccagggaagcctggagcagctggtgaagctggattgcctggactt
cctggagtggatggtttaacaggaactgatggcccacctggcccaaatgggcctccagga
gaccgtggtgcattaggacctgctgggcctcctggaccagctggcaaaggactaccagga
cctccagggcctccaggacccagtgggctcccgggtggacatggatttcggggtccttct
ggaccttttggtctgccaggattcccagggcctcctggaccgcctggacctcccggtctt
ccaggcgcccttcctgacggtggtggggaccttcagtgcccagctctgtgcccaccgggt
cccccaggtcccccaggaatgccagggttcaaggggcacactggtcacaaaggggaacct
ggtgaaatagggaaacaaggagagaagggtaaccctggccctcccgggcctccaggcatt
cctggcagtgttggcttgcagggcccaaggggactaagaggcctccctggtccaatgggt
ccagctggtgacagaggtgacattggtttcagaggcccacctggaatgccaggacctcca
gggaaagttggagaacaaggaatcaaaggacctcagggattccgggggcccaaaggagat
actggtaaacctggaccaaaaggaaacccaggggctcgtggactcataggagaacctggc
attcctggcaaggatgggcgggatggagcccctggactcgatggtgagaagggtgatgca
gctcctatgggtgctcctggagagaaggggccaaacggacttcctggactgcctggaaga
gcaggtcttaaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggt
ccctcgggagagccaggcatccctggtgatgttggtgtccctggtgagagaggactgcca
ggaccccgaggagcaactggaccactcggtctccaaggccccgtgggagcccgtggtgtc
cgaggtttccagggtcccaaaggtgccagtggtgaacctggccttcctggtccaactgga
atccgtggagaggcaggtgacaggggtcctattggtgttcctggtcccaaaggtaaccag
ggcattgctggagcagatggcctcccaggtgacaaaggagagctgggtccctttggtccc
cctggccaaaaaggagagccaggaaaaagaggagaacttggtccaaaaggtgcccaagga
cccaatgggacagctggatcaccggggatcccaggacatccggggcccatgggccatcag
ggggtgcagggtgttcctggcatcacaggaaaacctggacctcctggcaaagaggccagt
gaacaacatatcagagaactctgcggggagatgataaatgagcaaattgcacaattagct
gctaatctgaggaaacccttgtcccctggaatgacgggtcggcctggcccagccgggccc
ccaggtcctcctggagcaatgggaagtgttgggcatcccggtcctcgtggtccccctgga
tacagagggccaacaggagagcttggagatcctggccccagaggtgacactggtgaaaag
ggagataaaggacctgttggtcaaggtattgatggccctgatggtgatcaaggacttcaa
ggaccacctggtgtgcctggaattactaaaaacggccgtgatggggctcagggtgaaccc
ggcctgccaggggatcctggtactcccggtactattggggctcagggaactccaggaata
tgtgacacgtcggcttgcatgggagctgttgcagcatcaacttccaaaaaatcataa
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