KEGG   Empidonax traillii (willow flycatcher): 114056393
Entry
114056393         CDS       T05887                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl04510  Focal adhesion
etl04512  ECM-receptor interaction
etl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:etl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    114056393 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114056393 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114056393 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:etl00535]
    114056393 (COL9A3)
Proteoglycans [BR:etl00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   114056393 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 114056393
NCBI-ProteinID: XP_027737362
LinkDB
Position
Unknown
AA seq 678 aa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NT seq 2037 nt   +upstreamnt  +downstreamnt
atggctggattctccactcttgggctcctctccctgtgtcagtttttggccacagcatca
gctcagtcccttcagagagtaggaccacaaggccctcctggaccacgaggaccccctgga
ccgtctggcaaggatggcattgatggagaacctggccctcctggcttgccaggcccgcca
gggccaaaaggtgcaccagggaagcctggagcagctggtgaagctggattgcctggactt
cctggagtggatggtttaacaggaactgatggcccacctggcccaaatgggcctccagga
gaccgtggtgcattaggacctgctgggcctcctggaccagctggcaaaggactaccagga
cctccagggcctccaggacccagtgggctcccgggtggacatggatttcggggtccttct
ggaccttttggtctgccaggattcccagggcctcctggaccgcctggacctcccggtctt
ccaggcgcccttcctgacggtggtggggaccttcagtgcccagctctgtgcccaccgggt
cccccaggtcccccaggaatgccagggttcaaggggcacactggtcacaaaggggaacct
ggtgaaatagggaaacaaggagagaagggtaaccctggccctcccgggcctccaggcatt
cctggcagtgttggcttgcagggcccaaggggactaagaggcctccctggtccaatgggt
ccagctggtgacagaggtgacattggtttcagaggcccacctggaatgccaggacctcca
gggaaagttggagaacaaggaatcaaaggacctcagggattccgggggcccaaaggagat
actggtaaacctggaccaaaaggaaacccaggggctcgtggactcataggagaacctggc
attcctggcaaggatgggcgggatggagcccctggactcgatggtgagaagggtgatgca
gctcctatgggtgctcctggagagaaggggccaaacggacttcctggactgcctggaaga
gcaggtcttaaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggt
ccctcgggagagccaggcatccctggtgatgttggtgtccctggtgagagaggactgcca
ggaccccgaggagcaactggaccactcggtctccaaggccccgtgggagcccgtggtgtc
cgaggtttccagggtcccaaaggtgccagtggtgaacctggccttcctggtccaactgga
atccgtggagaggcaggtgacaggggtcctattggtgttcctggtcccaaaggtaaccag
ggcattgctggagcagatggcctcccaggtgacaaaggagagctgggtccctttggtccc
cctggccaaaaaggagagccaggaaaaagaggagaacttggtccaaaaggtgcccaagga
cccaatgggacagctggatcaccggggatcccaggacatccggggcccatgggccatcag
ggggtgcagggtgttcctggcatcacaggaaaacctggacctcctggcaaagaggccagt
gaacaacatatcagagaactctgcggggagatgataaatgagcaaattgcacaattagct
gctaatctgaggaaacccttgtcccctggaatgacgggtcggcctggcccagccgggccc
ccaggtcctcctggagcaatgggaagtgttgggcatcccggtcctcgtggtccccctgga
tacagagggccaacaggagagcttggagatcctggccccagaggtgacactggtgaaaag
ggagataaaggacctgttggtcaaggtattgatggccctgatggtgatcaaggacttcaa
ggaccacctggtgtgcctggaattactaaaaacggccgtgatggggctcagggtgaaccc
ggcctgccaggggatcctggtactcccggtactattggggctcagggaactccaggaata
tgtgacacgtcggcttgcatgggagctgttgcagcatcaacttccaaaaaatcataa

DBGET integrated database retrieval system