Empidonax traillii (willow flycatcher): 114057051
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Entry
114057051 CDS
T05887
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04010
MAPK signaling pathway
etl04517
IgSF CAM signaling
etl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114057051 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114057051 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114057051 (RAPGEF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114057051
NCBI-ProteinID:
XP_027738628
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRMMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSMRRGCECIVLEPSEMIVV
DYMEESEAYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENIQLTKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCTNLKRFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNN
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPSL
MFRTRKKKWRSLGSLSQGSSNAAVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRPGKSETSPVAPRAGIQQKVQQQQQ
QQHKVNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSED
TVSSASSQLSSPPTSPQSSPRKGYTLAPSSTVDNFSDSGHSEISSRSSIVSNSSFDSMPV
SLHDERRQRHSVSIVETNLGVGRIDRRIMIEPDQYSLGSYAPLSETRGLYAGATVLSSPS
TEELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDSSGDG
AGLWASGSHMDQLMFPDHGTKYGRQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIK
RRGGKDVSVEAETISITSVPAEETKPAPVPTHTAVSSSSSKGHVARKEGRYREPPPTPPG
YVGIPIAEFAEGGSHPTRKPPDYNIALQRSRMVARTCESHGTSTPQQQSHGHSTSRPANK
PQWHKPNESDPRLAHYPSQGFSTEEDEDEQVSAV
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagcgc
agcccccaggacttggagattgtttattcgtatttacatggaatggaagcgttgtcgaat
ctgagggagcatcagctaagaatgatgtgtgaaactgttagatatgaaagacatgaagca
aatgaagttctgtactaccctgatgacattggtagctgttggtatatcctgctgtctggt
tcagtcttcattaaagaatctatgtttcttccaaggagcagttttggcaagcgttctgcc
gggagtatgaggcgtggatgtgagtgcattgttctagagccatctgaaatgattgtggtt
gattatatggaagaaagtgaagcgtattttcagcgtcaagcatctcacaggcagtctcga
agaaggtttaggaaaatcaaccagaaaggggaacgacaaacaattattgatactgttgac
ccttatcctgtggggaaaccacctctacctagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatctagtcactcaggatgtagcatcactagtgattcaggaagcagcagcctt
tctgatatctaccaggctacagaaagtgaagcaggtgatatggatctcagtgggttacca
gagacagcagtggattctgaagatgatgatgatgaagaagacattgaaagagcatcagat
ccgttgatgagtagagatattgttagagactgcttggagaaagatccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcatcaattgcctgcttttgccaacatg
acaatgtcagtaaggagagaactctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactaaacgatggggaagagctggactcctggtcagtcatattgaatggc
tctgtggaggttacgtatcctgatggaagaacagagatactgtgcatggggaacagtttt
ggtgtttcccctaccatggaaaaggaatatatgaaaggagtgatgagaaccaaagtggat
gactgccagtttgtttgtatagcccagcaagattattgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtggaagaggaaggggagattgtgatggtgaaggagcacagggag
ctcgatcgcactggaacaagaaaaggtcacattgtcatcaagggaacagctgaaaggtta
acaatgcatttggtggaagaacactctgtggtagacccaacatttatagaagacttcctg
ttgacatatcggacctttctttccagcccaatggaagtgggcaagaagttgttggagtgg
ttcaatgaccccagcctcagggataaggttacacgggtagtactgttgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaac
aatttggagagggagaaaatgggtggacatttgaggctgttaaatattgcttgtgctgct
aaagctaaacgaagattgataaccttaacaaagccatctcgagaagcccctttgcctttt
atcttactgggagggtcagaaaagggatttggaatctttgttgatagtgtggattttggt
agcaaagctacagaagcaggcttgaaacgtggagaccagatactggaagtaaacggtcaa
aactttgaaaacattcagctgacaaaagccatggaaatccttagaaataacactcatttg
tctatcactgtgaaaaccaatttatttgtttttaaagaactcttaacacggttgtcagag
gaaaaaagaaacggtgctccccacctgcctaaaattggtgatattaaaaaggcgagtcgt
tattccatccctgaccttgctgttgatgtggagcaggtaataggattagaaaaagtaaat
aagaaaagtaaagccaacacagttgggggaagaaataagttaaagaagatacttgacaag
actcgaatcagtattctgcctcagaaaccgtacaatgacattggaattggccagtctcag
gatgacagcattgtgggactgaggcaaacaaagcacattcctcctgctttacctgtcagt
ggaaccctgtcatccagtaatcctgatctactgcagtctcatcaccgcattttagacttt
aatactactccagacttgccagatcaagttctgcgggttttcaaggcagaccagcaaagt
cgctacataatgatcagtaaggacacaacagcaaaagaagtggttatccaggctatcagg
gaatttgctctcactgcaacccctgatgcatattctctatgtgaagtatctgtcacacct
gagggtgtaatcaagcaaaggaggcttcctgatcagctatccaagcttgctgacaggata
cagctgagtggcaggtattacctgaagaacaacatggaaacagaaactctttgttcagat
gaagatgctcaagagttattaagggaaagtcaaatttccctactacagctcagtactgtt
gaggtggcaacccaactctccatgagaaactttgagctgttccgtaatattgaacccaca
gaatacatagatgacttgtttaaactcaaatcaaaaacaggttgcactaatctaaaaagg
ttcgaagaggtgataaatcaagaaacattctgggtggcttctgagattcttagagaaacc
aaccagctgaaaaggatgaagatcataaagcatttcattaagatagcactacactgcaga
gaatgcaagaacttcaactcaatgtttgccatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccaagcaaatatgaaaaactgtttcaagat
ctacaggacttgtttgatccatctaggaatatggcaaaatatcgtaatgtccttaacaac
caaaatctacagccccctattatccctctgtttcctgttatcaaaaaagaccttacattc
cttcatgaaggaaatgattctaaagtggagggtttggtcaattttgagaagctgagaatg
attgcgaaggagatacgccacgtcggtcgcatggcatctgtgaacatggatccttcttta
atgtttagaacaaggaagaagaaatggaggagtttggggtctctcagccagggcagttcc
aatgcagctgtgctggatgttgcgcaaacagggggtcataaaaagcgggtccgtcgcagc
tcctttcttaatgctaaaaagctgtacgaagatgctcagatggcacggaaggtaaagcag
tatctctcaaacttggatctggaaatggatgaagaaagcctccagaccctgtctctgcag
tgtgaaccagccaccaacacattaccgaaaaatacaggagacaagcgacctggaaaatct
gaaacatcaccagtggctccccgggcaggcatccagcagaaagtgcagcagcagcaacag
cagcaacataaagtaaaccaagcgttgcaggtccctgctgtatctctttatccctctcgg
aagaaagtgccagtcaaagaccttccaccatttggcattaactccccacaagctttaaag
aaaattctttccttatcagaagaaggaagtttggatcgtcacaagaaacaatctgaagac
acggtctcaagtgcatcttcacagttgtcttctcctcctacttcacctcagagctctcca
aggaaaggctatactttggctcctagcagcacggtggataacttttcagattctggtcac
agtgaaatttcttctagatctagtattgtcagcaattcctcttttgactctatgccagtc
tccctacatgacgagaggagacagaggcattctgtcagcatcgtggagacaaatcttggt
gtgggaaggattgatagaagaatcatgattgaaccagatcaatacagcttaggctcatat
gcaccactctcagagaccagaggcctgtatgctggagcaactgtgctttcttctcctagt
acagaagaactgtcacaggatcagggggacagagcttcgcttgatgcagctgacagtggc
cgtggtagctggacttcttgttcgagcggttctcatgataacatacaaacaatacagcac
cagaggagctgggagactctgccttttggacacgctcattttgatagttcaggcgatggg
gcaggactgtgggcctcaggcagccatatggaccagctgatgttccccgatcacggcaca
aagtatggcaggcaaagtcaaggcagggagggccttgatcaagcacagtccagagcaagc
tgggcatcctcaacaggatactggggagaggactcagaaggtgatacaggtaccataaag
cggaggggtgggaaggatgtttcggttgaagctgaaaccattagcataacatctgtacca
gcagaggagactaaaccggctcctgtgcccactcatacagcagtgtcatcaagtagttca
aaggggcatgttgcacgaaaagagggtcgatatcgggaaccacctccaactcctcctggt
tatgtaggaatacctattgctgagtttgcggagggtggctcccatccaaccagaaagcct
ccagattacaacatagcacttcagaggtctagaatggtggcacggacatgtgagagtcat
ggaacatcaactccacagcagcagtctcacggccattcgaccagcaggcctgcgaacaaa
cctcagtggcataaaccaaacgagtcagatccacgtcttgctcactatccatctcaaggg
ttttccacagaggaagatgaagatgaacaagtctctgctgtctaa
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integrated database retrieval system
