Empidonax traillii (willow flycatcher): 114062498
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Entry
114062498 CDS
T05887
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114062498 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114062498 (CNGB1)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114062498 (CNGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Thioredoxin_11
Motif
Other DBs
NCBI-GeneID:
114062498
NCBI-ProteinID:
XP_027749765
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MMGWINRVVPQPPVPPVTDETPQAPGQELEPVKAPTGKAGGPTDAADRARTEELVKKVEF
VVPEDTGSMLESMGSNVRFWLSYGLRRVIPQPVPVPVPAQATVQVLTKSFDTSIDVPNES
AFIHPWGKGRFPSPPKRVSPTLAVGWVTVCLAFQTEVQTLPDEDDGLEIIPFDPEEDNFE
EELDAPEEEWVGKRVLSWLSQGFERIVPQPEGMKNLETEQKDQKCEATVEGTKRTQTKAK
PKPSLSAALSTSVAETPADDTGQPEPVTTLTTQSMALDGLRMFIWFVQKLEKVLPQPVTT
GKQDTQGVAAATSNPAEQIHTPTGEPEETHLILEEITDEQINEEMCEMMAWSHKAEPEAD
VRSLPPIQEEPYEEEENRPYLSSLSTAKEEEGEEKKEEEEEKKKWRKEEEKTTTEEESAE
SLLSSLTADKAVDEAHFGEEALRFEQHEVAEISNLEGALVQVEEKTAEAAETNAEGITCS
STTPNGDESKQGDAAPSSMARRARDIELDRLVHDRPLGGGEPCPASRGALEQLPNVPSYR
ATAAPRAPAPSRTKAGVVNPNFCNEEQSPLGNYPTVEIKDVDSDAAENDGTHLPVPAASA
PNRLAVPVAASPRRKRLVPEDGLEEGLVSQSPTRALGWDEEQRESLPERIGSATSLSSAI
INTRLQELVKLFKERTEKVKEKLIDPDVTSDDESPTASPAKPAPAAAPVPPPGGEVEGDK
PSGDDHYCEMLCCTFKCQPWMDRLKSYRFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIP
VRWAFPYQTPANIHCWLLVDYLCDLIYLLDILVFQTRLQFVQGGDIITDKKAMKENYLRS
QRFKMDVLCLLPLDFFYFKIGVNPLLRFPRCLKYMAFFEFNNRLEAILTKAYIYRVIRTT
AYLLYSLHVNSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTL
FEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQN
RVKTWYEYTWHSQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDML
KRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLA
AGGGNRRTANVVAHGFANLFILEKKDLNEILVHYPESQKLLRKKAKKMLKNNNKPKEERG
GPGESLIIPPKPETPKLFKAALAATGRTGGKGPLAQLRWRLKELKAMQAAQGSSFCPKSP
VHQRSPVASRKEKTRLEEISSESSDHLVTVRVIPTAQEDEEILAAEISEKEDKEEGEK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgatgggctggatcaaccgggtggttccccagcccccggtgcccccggtgacggatgag
accccgcaggcccccgggcaggagctggagccagttaaggcaccaacaggaaaagccggc
ggccccacggatgctgctgacagggcacgcactgaggaactagtgaagaaagtagaattt
gtggtccctgaggacacaggttctatgcttgagagcatggggagcaatgtgcgcttctgg
ctctcttatgggctaaggagggtgattccccagccagtcccagtcccagtgccagcccaa
gcgacagtgcaggtgctcacgaagagcttcgatacaagcattgacgttcctaatgagtct
gccttcatccacccctggggaaagggcagatttccctccccacccaagagggtgagcccc
accttagctgtcgggtgggtgacagtctgtttggcttttcagacagaggtccagaccctt
ccagatgaggacgacggtcttgaaataatccccttcgatccagaggaggacaacttcgag
gaagaattggatgcccccgaagaggagtgggtaggaaagcgggtgctcagctggctgtca
cagggctttgagaggattgtgccgcagccagaggggatgaaaaatctggagacagagcag
aaggatcagaagtgcgaagccacagtggaaggcacaaaaaggactcaaacgaaggcaaag
ccaaaacccagcctttcagctgccctgagcacctcagtggcagagacaccagcagatgac
acggggcagccagagccagtgaccaccctcacaactcagtccatggctctggatggcctc
aggatgttcatctggtttgtccagaagctggagaaggtgctgccacagccagtgaccacg
gggaagcaggacacacagggagtggccgcagcaacctcgaatcccgcggaacaaattcat
acacccaccggggaacccgaggagacccacctcatcctggaagagatcactgatgagcag
attaatgaagaaatgtgtgagatgatggcctggagtcacaaggctgagccagaggcagat
gttcgctcccttccccccatacaggaggaaccttatgaagaagaagaaaacagaccgtat
ttgagctccctaagcactgccaaggaggaagagggggaggaaaagaaggaggaggaggaa
gagaagaagaaatggaggaaagaggaggagaagacgacgacggaggaggagagtgcagaa
tccctgctctcttctctcacggcggacaaggctgtggatgaagcccactttggcgaggag
gccctcaggtttgagcagcacgaagtagctgagataagtaatctcgaaggtgctcttgta
caggtggaagagaagacagctgaagctgctgaaaccaatgctgaaggtataacatgtagc
agtacaacaccaaatggggatgaatcaaagcaaggcgatgcggctcccagcagcatggcc
aggcgggcccgggacatcgagctagaccggctggtgcatgacaggccgctcggtggcggg
gagccctgccctgccagccgcggggccctagagcagctgcccaatgtccccagctaccga
gccaccgctgccccccgcgcccccgcccccagcaggaccaaggctggagttgtcaacccc
aatttttgcaatgaggagcaatcccctctaggtaattaccccaccgtggagatcaaggat
gtggacagcgatgctgcagagaacgatggtacccacttaccagtgcccgctgccagtgct
cccaacaggctggcagtgcctgtcgcagcatcccccaggaggaagcgactggtcccagag
gatggtctggaggagggactggtgagccagtcccccacccgagcgctgggctgggatgag
gagcagagggaaagcctgcctgagcgcatcggctcggccacgagcctgagcagtgccatc
atcaacacccggctccaggagctggtgaagctcttcaaagagaggacggagaaggtgaaa
gagaagctgattgaccccgatgtcacctcggacgacgagagccccacggcatcgcccgct
aagccggcacctgcggcagcaccggtgcctcccccgggaggggaggtggagggggacaag
ccctcaggggatgaccactactgtgagatgctgtgctgcaccttcaagtgccagccctgg
atggaccgcctgaaaagctaccggttccccagcagcatcgaccccctcaccaatctgatg
tacgtgctgtggctgttcttcgttgtcatggcctggaactggaactgctggttgatcccc
gtccgctgggctttcccctaccagacgccagcaaacatccactgctggctgctggtggac
tacctctgcgacctcatctacctgctggacatcctggtgttccagacccggctgcagttc
gtccagggcggagacatcataactgataaaaaggccatgaaagagaactacctgcgatca
caacgttttaagatggatgtgctgtgccttctgcccctggatttcttctacttcaaaatt
ggcgtcaaccccctcctgcgctttcctcgctgcctaaagtacatggccttcttcgagttc
aacaaccgcctggaggccatcctgaccaaggcatacatctacagagtgatccggaccact
gcctacttactgtacagcttgcatgtgaactcctgcctctattactgggcctcagcctac
gaaggactgggctctaccacctgggtctatgatggggaaggaaacagctacatccgctgc
tactactgggcagtcaagaccctcatcaccatcgggggcctgccagaccccaagacactg
tttgagattgtcttccagctgctgaactacttcacaggcgtctttgctttctctgtcatg
atagggcagatgagagacgtggttggcgccgctaccgcagggcagacttactaccggagc
tgcatggacagcaccattaaatacatgaacttctacaaaatccccaaaactgttcagaac
cgggtgaaaacgtggtatgagtacacgtggcactcgcagggcatgctagatgagtcagag
ctgctggtgcagctgccagacaagatgaggctggacatcgccatcgacgtgaactacaac
atcgtgagcaaagtggcccttttccagggttgtgacaggcagatgatctttgacatgctg
aagcggctcagatcggtggtctacctgcctaatgactacgtgtgcaagaagggagaaata
ggccgcgagatgtacatcatccaggcgggacaagtgcaggtgctggggggacccgacggc
aaatccgtgctggtgactctgaaagctggatctgtgtttggagaaataagcttgctggcg
gcaggagggggaaatcgccgaacagcgaacgtcgtagctcacggcttcgccaaccttttc
attttggagaagaaggacttgaacgagatcttggtgcactatccggagtcccagaagctg
ctgcgtaagaaggccaagaagatgctgaagaacaacaacaagcccaaagaggagagagga
ggccctggagagtcgctgatcattcccccaaaacctgagaccccaaagctcttcaaggct
gccctggctgccacggggaggacggggggcaaagggccactggcacagctgcgctggagg
ctgaaggagctgaaggcgatgcaggcagcccagggttccagtttctgtccaaaatcccca
gtgcaccagagatcgcctgtcgcctcccgcaaagaaaaaacccgcctggaagaaatatcc
tcagagtcctctgatcatttagtcactgttcgtgtgattcccacggcacaggaagatgag
gaaatcttggctgctgagatttcagagaaggaagacaaagaagaaggagagaaatga
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