KEGG   Empidonax traillii (willow flycatcher): 114067900
Entry
114067900         CDS       T05887                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114067900 (KDM4B)
Enzymes [BR:etl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114067900 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114067900 (KDM4B)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114067900 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_3 DUF4537 53-BP1_Tudor
Other DBs
NCBI-GeneID: 114067900
NCBI-ProteinID: XP_027759454
LinkDB
Position
Unknown
AA seq 1108 aa
MGSENPSPQNPGCKIMTFRPSLEEFRDFGKYIAYMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNE
TKAELKAKLLRRIGDEEEDNKHRSHRKKSQHRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGTDLEEEERSKGIEGEGECKVKARPPKVKGERKKKHLFHQHQHHLQAPQPPVQPPVP
PPAPQQQLAEGEAVAARPSVPPVPPVPTAAGKNLPPAPLNIIQPSEAPAEEEDFKPRPII
PMLYVVPRTKKVVFDKERMSCQQAFEQFATQKSLGWREQAVPLEIPGKEEENAERATSTE
VAAETASAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEEMFPFSGEEDMSDPEA
LKSLLSFQWKNKALNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQVDKEAGPVSAGEP
SSFIHLSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASC
YGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLN
VMERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVPME
PDDWPYVVSITCFKHKAANQNIPFRREVALGQTVITKNRNGLYYRCRVIGTTTQTFYEVN
FDDGSYSDNVYPESIISRDCIQMGPPLEGELVQLQWTDGIIYKAKFIAAQISQIYQVEFE
DGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRPAKRPRLGNPRNPEE
YGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3327 nt   +upstreamnt  +downstreamnt
atggggtcggaaaacccgagcccgcagaaccccggctgtaagatcatgaccttccgtccc
agcctggaggaattccgggatttcggcaagtacattgcctacatggaatcccaaggagct
caccgggcagggctggccaaggtgattcctcccaaggagtggaagccccggaggacctac
gatgacatcgatgacatggtgatcccagctcccatccagcaggtggtcactgggcagtcg
gggctcttcacccagtacaacatccagaagaagcccatgacggtgggggagtatcgacgc
ctggccaacagcgagaagtactgcacccctcgacaccaggatttcgaggacttggagcgc
aagtactggaagaatctcacctttgtgtctcccatttatggggctgatatcagtggctcc
ctgtatgatgcagacgtggatgaatggaatattggcaatctgaacaccctgctggacatg
gtggagcacgagtgtggcattatcatagagggtgtgaacaccccctacctctactttggg
atgtggaagacaacttttgcctggcacacagaggacatggatctctacagcatcaactac
ttgcattttggggagccaaaatcctggtacgccatccctccggaacacggcaagaggctg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatctctccctcaatcctgaagaaatacgggattcccttcgaccgg
atcacccaggaagccggagagttcatgatcacctttccctacggataccacgctggcttc
aaccacggcttcaactgcgccgagtccaccaacttcgccactctgagatggattgactac
ggaaaaatggcaacccaatgcacgtgccgcaaggacatggtgaagatctccatggacgtg
tttgtgagggtcctgcagccagaacggtacgatctgtggaaacaaggaaaagacatcgct
gtcctggaccacatgaaacccacagctctgaccagcccagaactggatgcctggaacgag
acaaaggcagagctgaaggccaaattgctccgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaaagagtcaacacagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagacgtgaaagtaaaagaggag
ctgaaaagagggacagacctggaggaagaggagagaagcaaagggattgagggagaaggg
gagtgcaaagtgaaggcccgtcctccgaaagtgaaaggcgagaggaagaagaagcacctt
ttccatcaacaccagcaccacctccaagccccccagccccctgtgcagcccccggtgcca
cccccagccccccagcagcagctggcagagggcgaggcggtggcagctcggccctcggtg
cccccggtacccccagtgccgaccgcggcggggaagaacctgcccccggctcccctcaac
atcatccagccctcggaggcgccggcggaggaggaggatttcaaacccaggcccatcatc
cccatgctctacgtggtgcccaggaccaagaaggtggtgttcgacaaggagcgcatgtcc
tgccagcaggccttcgagcagttcgccacccagaagagcctgggctggagggagcaggcg
gtgcccctggaaatcccagggaaggaggaggagaacgcagagagagcgacaagcacagag
gtcgctgcagagactgcttctgctttctccaaaatgaagatggagatcaaaaagagtcgt
cgtcaccccctgggcaaacccccgacccgctccccgctgtccgtggtcaaacaggagacc
tcaagtgatgaggaaatgtttccattttctggagaggaagatatgagcgatccggaggct
ttgaaatctttactttccttccagtggaagaataaagcacttaatttcccagctgaaagg
aaattcaatgcagctgctgccctgagtgagccatactgtgctgtctgcaccctcttctac
ccctacaaccagtccttacaggtggataaggaagctggcccagtgtccgcaggggagccc
tcctctttcatccacctttccaagtgtggacagaagaccaagcccctgatcccagagatg
tgctttacctcaagtggggaaaacacggagcccctcccttcaaattcctatattggagag
gatggaaccagccccttgatatcctgtgccaaatgctgcctgcaggttcatgctagctgt
tacggaattcgtccagacctggtgaacgagagctggtcttgctcgcggtgctcagccaac
gcgtgggcagcggaatgttgcctgtgcaatctcaggggaggagctcttcagatgaccact
gatgggcggtgggtccatgtaatctgtgctattgctgtccctgaggcccgtttcctcaat
gtaatggagcgtcatcctgtggatatcagcgctattccagagcagagatggaaactgaaa
tgtgtctactgtcggaagaggatgaagaaggtgtcgggtgcctgcatccagtgctcctac
gagcactgctctacgtccttccacgtcacgtgcgcgcacgcggccggggtgcccatggag
ccggacgactggccctacgtggtgtccatcacctgcttcaaacacaaagcagcgaaccag
aatatcccgttccgaagggaggtggccctggggcagactgtgatcacaaagaaccggaac
gggctctactaccggtgcagggtgatcggcacaacgacacagaccttctacgaagtcaac
ttcgacgacggttcctacagcgacaacgtctaccccgaaagcatcattagcagggactgc
atccaaatgggaccccctctggagggggagctggttcagctgcagtggacggatgggatc
atctacaaggccaagtttatcgcagcccagatcagtcagatttaccaggtcgagtttgaa
gatggttctcagctaatggtgaagcgtggagatatttataccttggaggaagagcttccc
aagagagtcaagtctcgcctgtccctcagcactggggcccctcaggaagatgtattttcg
ggagatgaagtgagaccagccaagcgtccccggctggggaatccaagaaatcctgaagaa
tatggacagaacccagactacctggcctttatggagagcctgttgcagacacagtaccag
cctgggactcagagcaacatgttttaa

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