KEGG   Empidonax traillii (willow flycatcher): 114068025
Entry
114068025         CDS       T05887                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114068025 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:etl03041]
    114068025 (SF3A1)
Spliceosome [BR:etl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114068025 (SF3A1)
 Complex B
    114068025 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    114068025 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 114068025
NCBI-ProteinID: XP_027759653
LinkDB
Position
Unknown
AA seq 790 aa
MPAGPVQAVPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPSEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggccgtgccgccggcgcagcccgcgccccccgccgagagc
aaaccgccagaagaggagcctaaagaggaagcagcaccagccaagcccgtggtgggaatc
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aacggcccagaatttgaggcccgaattcgtcagaatgagataaataacccaaagttcaac
ttcctgaaccccaacgacccctaccatgcctactaccggcacaaggtcagcgagttcaag
gagggcaaggcccaggagccctcagctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagctcccacagaaggtgcaggcccaggtgatccaggagacggtggttccg
aaggagccgcccccggagttcgagttcatcgcggaccctccgtccatctccgccttcgac
ctggacgtggtgaagctcacggcgcagttcgtggctcggaatggccgccagttcctcact
cagctcatgcagaaggagcagaggaactaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcaccaagctggtggagcagtacaccaagatcttgatcccaccgaag
ggtttactcctcaagctcaagaaggaggctgaaaatcccaaggaagtcctagatcaggtg
tattacagagtggagtgggccaagttccaggagcgagaaaggaagaaggaagaggaggag
aaggagaaggaacgtgttgcttatgcccagattgattggcatgactttgtggttgtggaa
acagttgacttccagcccagtgagcaagggaatttccctcctcccaccactccggaagag
ttgggagctcgaatcctgatccaagagcgttacgagaagtttggggaaagtgaggaggta
gagatggaggtggagtcagatgaggaagatgaaaagcaagagaaaacggatgagccccca
gcccagctggatcaggacacacaagtgcaggatatggatgagggctcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaaccccgatgccaccccctcttcctcccaca
ccggatcaggtcatcgtgcggaaggattatgatcccaaagcctcaaaaccattaccacct
gctccggctccggatgagtatttggtttctcccatcactggagagaaaattccggccagt
aagatgcaggagcacatgaggatcggcctcctggatccacggtggctggagcagcgcgac
agatccatccgggagaagcagagtgacgacgaggtctatgccccaggtttggatattgag
agcagcctgaagcagctggcagagcgccgtaccgatatcttcggtgtagaagagactgcc
atcggtaaaaagatcggtgaagaggaaatccagaaaccagaggaaaaggtgacctgggat
ggccactcgggcagcatggcccgcacacaacaggctgctcaggccaacatcactctccaa
gagcaaatcgaagccattcacaaggccaagggcctggtgccagaggatgacagcaaggag
aagatcgggcccagcaaacccaacgagatcccccagccaccccctccttcctcagcctcc
aatccccccgccagcgctcagcccatcacgtccgtgcctcgtccgcccaccatgccccct
cctgtccgtgccgccgtggtctctgccgttccggtcatgcctcggcccccgatgacgtcc
gtggtccggctgcctccgggctccgtcatagccaccccgatgccccccatcatccacacc
ccccggatcaacgtggtgcccatgcccccctctgctccccccatcatgagcccccgcccg
ccccccatgatcgtacccacagcgtttgtcccggcgcctcccgtggctccggttccgtcc
ccggcgccgatgcctcccgttcaccccccaccacccatggaggatgaaccagtctccaag
aaactcaagagtgaggatagtctgattccagaggaggaattcctgcgcaggaacaagggc
ccagtcacggtcaaagtccaggttcccaacatgcaggacaagacggaatggaagctgaac
ggccaagtgctggtgttcaccctgcccctctcagaccaggtgtctgttataaaggttaag
atccacgaggccacagggatgccagctgggaagcagaagctgcagtatgagggcatcttc
atcaaggattccaactctctggcttattacaacatgacgagtggctctctgattcacctg
gcactcaaagagagaggaggcaggaagaaatag

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