Empidonax traillii (willow flycatcher): 114068090 Help Entry 114068090         CDS       T05887                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04510   Focal adhesion etl04512   ECM-receptor interaction etl04518   Integrin signaling etl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:etl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114068090 (COL6A1)    04518 Integrin signaling     114068090 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114068090 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114068090 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:etl04147]     114068090 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:etl00536]     114068090 (COL6A1) Exosome [BR:etl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    114068090 (COL6A1) Glycosaminoglycan binding proteins [BR:etl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114068090 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    114068090 (COL6A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 vWA-TerF-like Motif Other DBs NCBI-GeneID:  114068090 NCBI-ProteinID:  XP_027759786 LinkDB All DBs Position Unknown AA seq 1024 aa AA seqDB search MRLQDFLLALLLPAGFLWGGSYAQQRPEISTRVSSAEDCPVDLFFVLDTSESVALRVKPF GDLVTQVKDFTNRFIDKLTKRYYRCDRNLVWNAGALHYSDEVVLIKSLTPMPSGQSELKN RVSSINYIGKGTYTDCAIKRGIEELLIGGSHHKENKYLIVVTDGHPLEGYKEPCGGLDDA ANEAKHLGIKVFSVAISPNHLDQRLNIIATDHAYRRNFTATSLKPTRELDVEETINTIID MIKVNTEQSCCSFECQPPRGPPGPPGDPGHEGERGKPGLPGQKGEAGSPGRPGDMGPVGY QGMKGDKGSRGEKGSRGAKGAKGEKGRRGIDGIDGMKGEAGYPGLPGCKGSPGFDGAQGP PGPKGDPGAYGPKGGKGEPGNDGKPGRQGIPGSPGEKGARGNQGEPGPVGETGDEGAPGA DGPPGERGSNGERGAPGSPGDRGLRGEPGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGY RGDDGPRGNEGPKGSPGAPGLPGEPGLMGERGEDGPPGNGTVGFIGAPGQPGDRGDPGIN GTKGYVGLKGDEGEAGDPGNDNPNPGPRGIKGAKGYRGPEGLPGPPGPVGPPGPDECEIL DIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGE SRVGVVQYSHDNTQELVAMGDANIDNIGALKQAVKNLNWIAGGTYTGEALQFTKDNLLRR FTSDKRVAIVITDGRSDTLRDPTPLNSLCDVTPVVSLGIGDIFRNPPNPDHLNDIACLSR PTRPGLSIQRDNYAELLDDTFLQNITSYVCQEKKCPDYTCPITFTSPADITLLVDSSTSV GSKNFETTKKFVKRLAERFLEAGKPADDSVRVSVVQYSGSSQQRVEAQFQHNYTVIAKAI DNMEFMNDATDVNAALQYVTQMYQRSARAGAKKRVLVFSDGHSQGITAGAIERAVQEAQR AGIEIYVLAVGSQANEPNIRVLVTGKSADYDVVYGERHLFRVPDYTSLLRGVFYQTVSRK IAVD NT seq 3075 nt NT seq  +upstreamnt  +downstreamnt atgaggctgcaagactttctactcgctttgctgctcccggccggcttcctgtgggggggc tcgtacgctcagcagcgcccagaaatctccacccgagtctccagcgcagaagactgccct gtggacctgttctttgtcctggacacctcagagagcgtcgccctgagggtgaagcccttt ggggaccttgttacccaagtgaaagatttcaccaaccggttcattgataagctgaccaag aggtattaccgctgtgaccgcaacctggtgtggaacgcgggggctctgcactacagcgat gaggtcgtgctcatcaagagcctgaccccgatgcccagcggccagagcgaactgaagaac cgcgtctcgtccatcaactacatcgggaagggcacctacaccgactgcgccatcaagagg ggcatcgaggagctgctcatcggcggttcccatcacaaggagaataaatacctgattgtg gtgactgatggacatcccttggaaggttacaaggagccctgtggaggcctggatgatgct gccaacgaggccaaacatttggggatcaaagtgttctctgttgccatctcccccaatcac ctggaccagcggctcaacatcattgccacggaccacgcctaccgccgcaatttcaccgcc accagcctgaagccgacccgggagcttgacgtggaggaaaccatcaacaccatcatcgac atgattaaagttaacacggagcagtcgtgctgctcctttgagtgccagcctcctcgaggg ccccctggacctcctggtgacccaggccatgagggagaaagaggaaagccaggccttcct ggccagaaaggagaagctggaagcccaggcaggccaggggacatgggacctgttggctac caaggaatgaagggtgacaaaggaagccgaggagaaaagggctcaagaggagccaaagga gccaagggtgaaaaaggccggcgtggaatcgatggcatcgatggcatgaagggtgaagct ggataccctggattacctggatgcaaaggctcacctggattcgacggagcccaaggccca cctggaccaaagggagatcctggtgcttacggacccaagggaggaaagggggagcctggg aatgacggaaaacctggccggcaggggattcccggcagccctggagagaagggcgctaga ggaaaccaaggtgagcctgggcccgtaggagagactggtgatgagggcgctccgggtgca gatggtcctcctggagagcggggtagcaatggagaaagaggagcaccgggctcaccgggt gaccgcgggctgagaggagagccgggagagcctggaccacctggtgaccaagggcgagaa ggacccctcggaccaccgggcgaccagggggaacctggacccccaggacccaaaggctac aggggagatgatggcccccgtggcaacgagggcccaaagggatcgcctggagcacctggg ctgcctggagaacccggtctgatgggagaaaggggagaggatggccctcctggaaatggc actgtcggattcataggtgccccagggcagccaggagacagaggtgaccctggcattaat ggaacaaaaggctatgttggacttaaaggtgatgaaggagaggctggagatcctggcaat gataacccaaaccctggccccaggggcatcaaaggagcgaagggctacaggggacctgaa ggtctcccgggaccaccaggacctgtggggcctccaggaccagatgaatgtgaaatcttg gacatcatcatgaagatgtgctcttgctgtgagtgcacctgtggtcccgtcgacctcctc tttgtgctggacagctcggagagcatcggcctgcagaacttccagattgccaaggacttc atcatcaaggtcatcgaccgcctgagcaaggacgagcgggtcaagtttgagcccggggag tcccgtgtgggcgtcgtgcagtacagccatgacaacacgcaggagctggtggccatgggg gatgccaacatagacaacatcggggcgctcaaacaggccgtcaagaacctgaactggata gctggggggacctacactggggaagccctgcagttcaccaaggacaacctgctgcggaga ttcacctccgacaagcgcgtcgccatcgtcatcacggacgggcgctccgacacgctgcgg gaccccaccccgctcaactccctgtgcgatgtcaccccggtggtttcccttgggataggt gatattttccggaaccctcccaacccagatcacctgaacgacattgcctgcttgagcaga ccaaccaggccaggactgtccattcaaagggacaattacgccgagctcctggatgacacc ttcttgcagaacatcacctcgtacgtctgccaagagaagaaatgtcctgactacacctgc ccaatcaccttcaccagcccggcggacatcaccctgctggtggacagctccaccagcgtg ggaagcaagaactttgagaccaccaagaagttcgtgaagcggctggcggagcggttcctg gaggccggcaagcccgccgacgactcggtgcgcgtctcggtggtgcagtacagcggcagc agccagcagagagtggaagcccagttccagcacaactacacggtcatcgccaaggccatc gacaacatggagttcatgaatgatgccacggacgtcaacgccgccctgcagtatgtcacg cagatgtaccagcgctccgcccgcgccggggccaagaagagggtgctggtgttttccgac gggcactcccaggggatcaccgcgggcgccatcgagagggcggtgcaggaggcccagcgg gccggcatcgagatctacgtgctggccgtgggcagccaggccaacgagcccaacatccgc gtcctggtcacggggaagagcgcggattacgacgtggtctacggggagcgccaccttttc cgtgtgcccgactacacctccctgctgcgtggcgtcttctaccaaactgtctccaggaag atagctgttgactga

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