Empidonax traillii (willow flycatcher): 114071750
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Entry
114071750 CDS
T05887
Name
(RefSeq) protocadherin beta-6-like
KO
K16494
protocadherin beta
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114071750
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114071750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
114071750
NCBI-ProteinID:
XP_027765408
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
LSLPLARSQPIRYSVAEEAHSGSLVGNLAQDAALPPAQLSARRARLVSEDGRQHFRFDRA
SGLLVVADRLDREQLCGQADTCTLPFELLLADPLQFFRVEVTLEDINDHSPVFPEERVTF
KIPETSDPGSRFPLEVAWDLDVGSNSVQAYSITPENEYFSVSYGSRITGKKSVELVLEKP
LDREEQAEMDFSLIAVDGGSPPRSGSAQIHIVVLDVNDNAPVFTQEEYMGKVSENTPKGS
VVMSVLATDRDSGINGDITYQFRQAMDHSDSAFEIDPITGEIKLTKPLDFEAAQTHEFSV
RATDGGGLSAICKVVVEVLDVNDNAPELLVSSFSSPLAENSAPGTVVALFTVRDRDAGAN
GKVSCALEHQLFFSLRPAYKNYYELVTVRALDREDTAQHILTVTAADAGSPPLTTTHTFT
VDISDVNDNAPVFNQTSYTMYVRENNAPSVLVGAVSAADADVGLNAKVTYSLSAGQAAER
PWCSCVSVNPESGQVFVLRALDYEQLRQTAAGTLPRPYCYEISLTTGSDNSEFRFLKPFV
PSLPPQPCAVGGSTGEEQAGHVLSGADNLPSGLADAAAAGTLPRPYCYEISLTTGSGNSE
FRFLKPFVPSLPPQPCVMGGDTGEEQVFPCVPVPTEDVTPDNSGPVSAEQFNRLSFN
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ctctccctgccgctcgctcgctcgcagcccatccgctactccgtagccgaggaggcgcac
agcggctccctggtaggcaacctggcgcaggacgcggcgctgccgccggcgcagctctcg
gctcgccgcgcccgcctggtgtcggaggacggccgccagcattttcgcttcgaccgcgcc
agcggcctcctcgtcgtggccgacaggctggaccgggagcagctgtgcggccaggccgac
acctgcacgctccccttcgagctgctgctggccgacccgctgcagttctttcgggtcgag
gtcaccctggaggacatcaatgaccattcacccgttttccctgaggaacgagtcactttt
aagatccccgaaacgagcgatcccggctctcgatttcctctggaggtcgcttgggacttg
gatgttggcagtaacagtgtacaggcatacagcatcacacccgagaacgagtactttagc
gtctcctatgggagtcggattacaggcaagaagtctgttgaacttgttttggaaaagccc
ctagacagagaagagcaggcagagatggatttcagtctgattgctgtggatgggggctct
cctcccaggagtgggagcgcccaaatccatatcgtcgtcctagatgtcaatgacaatgct
cctgtcttcacacaggaagagtatatggggaaggtttcagaaaacactccaaaaggctct
gtggttatgagtgtgttggcaacagatcgggattcaggaattaatggggacattacttat
cagttcagacaagcaatggaccacagcgactcagcatttgagattgatcccataacaggt
gaaattaaactcacaaagcctctggactttgaggcagcacagactcacgagttcagtgtg
agggccacagatggtggggggctctcggcaatctgcaaggtggtggtggaggtgttggat
gtgaatgacaatgcacccgagctgctggtcagttccttcagcagtcccctcgccgagaac
tccgcgcccggcacggtggttgccctctttactgtcagggaccgagatgccggtgccaac
ggcaaggtgtcctgtgccctcgagcatcagctcttcttctccctgcggccagcctataag
aattactacgagctggtgactgtgagggcgctggaccgggaggacacggctcagcacatc
ctcactgtgacagcagcagacgcggggtcccctcctctcactaccacccacaccttcacc
gtggacatctcggatgtcaacgacaacgcccccgtcttcaaccagacatcctacaccatg
tacgtgcgagagaacaacgcgccctccgtgctggtgggagccgtgagcgcggcagatgcc
gacgtggggctgaatgccaaggtgacctattccctgtcagcagggcaagcggcggagcgg
ccttggtgctcgtgcgtgtctgtgaaccccgagagcgggcaggtgtttgtgctgagagcc
ctggactacgagcagctgaggcagactgctgcagggaccctgccccgcccctactgctac
gagatcagcctcaccacgggctcggacaacagcgagttcaggttcctcaagcccttcgtc
cccagcctgccaccacagccctgtgccgtgggcgggagcaccggtgaggaacaggctggc
cacgtgctttccggggccgacaacctgccgagcggcctggccgatgcagctgctgcgggg
accctgccccgcccctactgctacgagatcagcctcaccacgggctcgggcaacagcgag
ttcaggttcctcaagcccttcgtccccagcctgccaccacagccctgtgtcatgggcggg
gacaccggtgaggaacaggttttcccttgtgtccctgtccccacagaggacgtgacccca
gataattctgggcctgtgtctgcagaacagttcaatcgtctttcctttaactag
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