Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_2804
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Entry
ECUMN_2804 CDS
T00831
Symbol
hyfR
Name
(GenBank) DNA-binding transcriptional activator, formate sensing
KO
K12146
hydrogenase-4 transcriptional activator
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eum03000
]
ECUMN_2804 (hyfR)
Transcription factors [BR:
eum03000
]
Prokaryotic type
Helix-turn-helix
Other families
ECUMN_2804 (hyfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
Mg_chelatase
GAF_3
AAA
HTH_8
MCM
AAA_2
AAA_22
AAA_16
AAA_7
Parvo_NS1
ResIII
AAA_3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CAR13982
UniProt:
B7N673
LinkDB
All DBs
Position
2891253..2893265
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AA seq
670 aa
AA seq
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MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLK
SNFYYRYHDDGSDVTATAEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTPQDCTLF
NWLAHIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVARE
IHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRCMPGESVLLTQTLQTRQPTL
THRADDLFLWQRDPLLHLLASNGCESALLIPLTFGNHTPGTLLLAHTSSTLFSEENCQLL
QHIADRIAIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGVGDIIYQSQAMEDLLQQ
VDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHD
KGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVN
VRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHM
NRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNE
DSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQ
RLGISVREVL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcagacgaggcgatgtttgccccgccgcaaggaataacaattgaagcggta
aacggaatgctcgcggagcggttagcgcagaaacacggcaaggcgtctttattacgcgcc
ttcatcccgctgccgccgccgttcagcccggtacaacttattgaactgcacgttctcaaa
agcaacttctattaccgctaccatgatgatggcagcgatgtgacggcaacagcagagtat
cagggcgagatggtcgattattcgcgtcacgccgtccttctcggcagtagtggaatggcg
gagctacgctttattcgcacccacggcagtcgttttactccccaggattgcacactgttt
aactggctggcacacataatcactccggttctgcaatcatggctcaatgatgaagaacag
caggtggcgctgcgtttgctggagaaagatcgcgatcatcatcgggtactggtggatatc
actaatgcagtgttgtcacatcttgatctcgacgatctgatcgctgacgtcgctcgtgag
atccatcattttttcggtctggcttcagtcagtatggtactgggcgatcatcgaaagaac
gagaagttcagcctgtggtgcagcgatctttctgcctcacattgtgcgtgtctgccacgc
tgtatgcctggcgaaagtgtattgctgacacaaacgctacaaacccgacaaccgaccttg
acgcaccgtgcagacgatctgtttctctggcaacgcgacccgttattacacttacttgca
tctaacggctgcgaatctgcgctccttataccgctcacctttggcaaccatacaccgggc
acattgttgctggcgcatacctcttccactctctttagtgaggaaaactgccagctacta
caacatattgccgatcgcatcgctattgccgttggcaatgccgatgcctggcgcagcatg
accgatttgcaggaaagcttgcagcaagaaaaccaccagcttagcgagcagctcctttcg
aatctgggcgtcggtgacattatctatcaaagccaggcaatggaagatttgctccagcag
gtagatattgtggcgaagagcgacagtacggtgttgatttgtggtgaaaccggaaccggc
aaagaggtgatcgccagagcgatccatcaacttagcccacgacgcgacaagccactggtc
aaaatcaactgcgctgccatccccgccagtcttctggaaagtgagttattcggtcatgac
aaaggggcatttactggtgcgattaatacccatcgtggtcgttttgaaattgccgatggc
ggcacgttgtttctcgatgaaattggcgatctgccgttagaacttcagcctaaactgctg
cgcgtattgcaggaacgggagattgagcgtctcggcgggagtagaacgatcccggtaaat
gtcagagtcattgccgccaccaaccgtgatttgtggcaaatggttgaagatcgccagttt
cgcagcgatctcttttatcgcctgaatgtcttcccactggaattgcccccgctacgcgac
cgtccggaagatatccctcttttagcaaaacatttcacgcaaaaaatggcgcgccatatg
aatcgcgcaattgacgccatcccgaccgaggcgctacgccagttgatgtcgtgggactgg
ccgggcaacgtgcgcgagctggaaaacgtgattgagcgggcggtactactgactcgcggt
aacagtctgaatttacatcttaatgtccgacaaagccgtttactgccgacgctaaatgaa
gattcagcgcttcgcagttcaatggcacagttgctgcacccgacgacgccagagaatgac
gaagaagaacgtcagcgcattgttcaggtattgcgagaaaccaatggcattgttgccggg
ccccgtggcgcggcgacacgattagggatgaagcgcaccacgctgctgtcacgaatgcag
cgtctggggatctcggttcgcgaggtgttgtaa
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