Eutrema salsugineum (saltwater cress): ASK66_gp075 Help Entry ASK66_gp075       CDS       T02985                                  Symbol rpoB Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03020   RNA polymerase Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     ASK66_gp075 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:eus03021]     ASK66_gp075 (rpoB)    03400 DNA repair and recombination proteins [BR:eus03400]     ASK66_gp075 (rpoB) Enzymes [BR:eus01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      ASK66_gp075 (rpoB) Transcription machinery [BR:eus03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      ASK66_gp075 (rpoB) DNA repair and recombination proteins [BR:eus03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       ASK66_gp075 (rpoB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  26119333 NCBI-ProteinID:  YP_009175667 UniProt:  A0A0U2HM59 LinkDB All DBs Position CP AA seq 1072 aa AA seqDB search MLGDGKEGTSTIPGFNQIQFEGFYRFIDQGLIEELSKFPKIEDIDHEIEFQLFVETYQLV EPLIKERDAVYESLTYSSELYVSAGLIWKTSRNMQEQRIFIGNIPLMNSLGTSIVNGIYR IVINQILQSPGIYYQSELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISI LVLSSAMGSNLREILENVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFSCVGGDPIFS ESLCKELQKKFFHQRCELGRIGRRNINWRLNLNIPQNNIFLLPRDILAAADHLIGMKFGM GTLDDMNHLKNKRIRSVADLLQDQLGLALARLENVVKGTIGGAIRHKLIPTPQNLVTSTP LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGR ICPIDTSEGINVGLIGSLSIHARIGDWGSLESPFYELFEKSKKARIRMLFLSPSQDEYYM IAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEEVHLRSILPFQYFSIGASLIPFIEHND ANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIAEHEGKILYTDTEKIILS GNGHTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVDGELALGKNILVA YMPWEGYNFEDAVLISECLVYGDIYTSFHIRKYEIQTHVTTQGPERITKEIPHLEGRLLR NLDKNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRAILGIQVSTSKETCLKLP IGGRGRVIDVRWVQKKGGSSYNPEIIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQD MPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRK LVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKI HGRSSGHYALVTQQPLRGRSKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQE VLGTTIIGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEV NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt atgctcggggatggaaaagagggaacatctacaatacccggatttaatcagatacaattt gaagggttttatcggtttattgatcagggtttaatagaagaactttctaaatttccaaaa atagaagatatagatcatgaaattgaatttcaattatttgtggaaacatatcaattggta gaacctctgataaaagaacgagatgctgtctatgaatcacttacatattcttctgaatta tatgtatccgcgggattaatttggaaaactagtaggaatatgcaagaacaaagaattttt attggaaacattcctttaatgaattcccttggaacttctatagtaaacggaatatacaga attgtgatcaatcaaatattacaaagtcctggtatctattaccagtcagaattggatcat aacgggatttcggtctataccggcaccataatatcagattggggaggcaggttagaatta gagattgataaaaaagcaagaatatgggctcgtgtgagtaggaaacagaaaatatctatt ctagttctatcatcagctatgggttcgaatctaagagaaattctagagaatgtttgctac cctgaaattttcttatccttcttgaatgataaggagaaaaaaaaaattgggtcaaaagaa aatgctattttggagttttatcaacaattttcttgtgtaggtggggatccaatattttct gaatccttatgtaaggaattacaaaaaaaattctttcaccaaaggtgtgaattaggaagg attggtcgccgaaatattaactggagactgaatcttaatatacctcagaacaatatattt ttgttaccacgagatatattagccgctgccgatcatttgattgggatgaaatttggaatg ggtacacttgatgatatgaatcatttgaaaaataaacgtattcgctctgtcgcggatctt ttacaagaccagctcgggttggctctggctcgtttagaaaatgtagttaagggaactata ggcggagcaattaggcataaattgatacctactcctcagaatttggtaacttcaactccg ttaacaactacttatgaatcctttttcggattacacccattatctcaagttttggatcga actaatccattgacacaaatcgtgcatgggagaaagttgagttatttgggccccggcgga ttaacagggcgaactgctaattttcggatacgagatatccatcctagtcactatgggcgt atttgccccattgacacgtctgaaggaatcaatgttggacttattggatctttatcaatt catgctaggattggtgattgggggtcgttagaaagtccattttatgaactctttgagaaa tcaaaaaaagcacggatacggatgctttttttatcaccaagtcaagatgaatattatatg atagcagcaggaaattctttggctcttaatcgaggcattcaagaagaacaggctgtacca gctcgataccgccaagaatttttgactatcgcatgggaagaggttcatcttcgaagcatt ttgcctttccaatatttttccattggagcttccctaattccttttatcgaacataatgat gcgaatcgagctttaatgagttctaatatgcaacgtcaagcagttccactttctcggtcc gaaaagtgcattgttggaactggattggaacgccaagtagctttagattcgggggttccc gctatagccgaacacgagggaaaaatcctttatactgacactgagaagataattttatcg ggaaatggacatactctaagtattccattaattatgtatcaacgctcaaacaaaaatact tgtatgcatcaaaaacctcaggttcggcggggtaaatgcattaaaaagggacaaatttta gcggatggtgctgctacagttgatggggaactcgctttggggaaaaatatattagtggct tatatgccatgggaaggatacaattttgaagatgcggtactgattagtgagtgtctagta tacggtgatatttatacttctttccacatacggaaatatgaaattcagacgcatgtgaca acccaaggtcctgaaaggatcactaaagaaataccgcatctagaaggccgtttactccga aatttagacaaaaatggaattgtgatgctaggatcgtgggttgaaacgggtgatatttta gtaggtaaattaacacctcaggtggcgaaagaatcctcgtatgctccggaagatagatta ttacgggctatacttggcattcaggtatcgacttcaaaagaaacttgtttaaaattgcct ataggtggtagaggtcgagttattgatgtgagatgggttcagaaaaaggggggttcaagt tataacccagaaataattcgtgtatatatttcacagaaacgtgaaatcaaagtaggtgat aaagtagctggaagacatggaaataaaggtatcatttcaaaaattttgcctagacaggat atgccttatttgcaagacgggagacccgtggatatggtcttcaacccattaggagtaccc tcacgcatgaatgtaggacagatatttgaatgctcgcttgggttagcgggaagtctgcta gatagacattatcgaatagccccttttgatgagagatatgaacaagaggcgtcgagaaaa ctagtgttttctgaattatatgaagccagtaagcaaacagcgaatccatgggtatttgaa cccgagtatccaggaaaaagccgaatttttgatggaagaacaggagatccttttgaacag cctgtgataataggaaagccctatatcttgaaattaattcatcaggttgatgataaaata cacggacgttctagtggacattatgcacttgttacacaacaaccccttagaggccgttct aagcagggggggcagcgggtaggcgaaatggaggtttgggctctagaggggtttggtgtt gctcatattttacaagagatgcttacttataaatctgatcatattagagctcgccaagaa gtacttggtaccactatcattggaggaacaatacctaaaccagaagatgctccagaatct tttcgattacttgttcgagaactacgatctttggctctggaactgaatcatttccttgta tctgagaagaatttccagattaataggaaggaagtttaa

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