Eutrema salsugineum (saltwater cress): ASK66_gp076 Help Entry ASK66_gp076       CDS       T02985                                  Symbol rpoC1 Name (RefSeq) RNA polymerase beta' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03020   RNA polymerase Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     ASK66_gp076 (rpoC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:eus03021]     ASK66_gp076 (rpoC1)    03400 DNA repair and recombination proteins [BR:eus03400]     ASK66_gp076 (rpoC1) Enzymes [BR:eus01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      ASK66_gp076 (rpoC1) Transcription machinery [BR:eus03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      ASK66_gp076 (rpoC1) DNA repair and recombination proteins [BR:eus03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       ASK66_gp076 (rpoC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 Motif Other DBs NCBI-GeneID:  26119331 NCBI-ProteinID:  YP_009175666 UniProt:  A0A0U2LTE5 LinkDB All DBs Position CP AA seq 680 aa AA seqDB search MIDRYKHQQLRIGLVSPQQISAWATKKIPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERI FGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLTCPVTHVWYLK RLPSYIANLLDKPLKELEGLVYCDFSFARPITKKPTFLRLRGSFEYEIQSWKYSIPLFFT TQGFDIFRNREISTGAGAIREQLADLDLRIIIENSLVEWKQLGEEGPTGNEWEDRKIVRR KDFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVI YRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVI EGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLA SNIGVAKSQIREKKPIVWEILQEVMQGHPVLLNRAPTLHRLGIQSFQPILVEGRTICLHP LVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLY VLTSGTRRGICANRYNPWNRKNYQNEIIYETNYKYMKEPFFCNSYDAIGAYRQKRINLDS PLWLRWQLDQRVIASREVPIEVHYESFGNYHEIYAHYLIVRSVKKETFCIYIRTTVGHIS FYREIEEAIQGFSQACSYDT NT seq 2043 nt NT seq  +upstreamnt  +downstreamnt atgatcgatcggtataaacatcaacaactccgaattggattagtttctcctcagcaaata agtgcttgggccactaaaaaaatacctaatggagagatagttggagaggtgacaaaaccc tatacttttcattacaaaaccaataaaccggaaaaagatggattattttgtgaaaggatt tttgggcctataaagagtggaatttgcgcttgtggaaattatcgagtgatcggagatgaa aaagaagacccgaaattttgtgaacaatgtggagttgaatttgttgattctcggatacga agatatcaaatgggatacataaaactgacatgtcctgtaactcatgtatggtatttgaaa cgtcttcctagttatattgcgaatcttttagataaaccgcttaaagaattagaaggccta gtatactgcgatttttcttttgctaggcccataactaaaaaacctactttcttacgatta cgaggttcatttgaatatgaaattcaatcctggaaatacagtatcccgcttttttttact actcaaggtttcgatatatttcgaaatcgagaaatttctactggggcgggtgctatccga gaacaattagccgatttagatttgcgaattattatcgaaaattcgttggtagaatggaaa caattaggagaagaaggtcccacggggaatgaatgggaagatcgaaaaattgtaagaaga aaagattttttagttagacgtatggaattagcgaagcattttattcgaacaaatatagaa ccggaatggatggttttatgtctcttaccggttcttcctcccgagttgagacccatcatt cagatagaagggggtaaactaatgagttcagatattaatgaactctatagaagagttatc tatcggaacaatactcttaccgatctattaacaacaagtagatctacaccaggggaatta gtaatgtgtcaggaaaaattggtacaagaagccgtagatacacttcttgataatggaatc cgtggacaaccaatgagggatggtcataataaggtttacaagtcattttcagatgtaatt gaaggcaaagagggaagatttcgcgagactctgcttggcaaacgggtcgattattcgggg cgttcggtgattgtcgttggaccttccctttcattacatcgctgtggattgcctcgcgaa attgcaatagagctctttcagacatttgtaattcgtggtctaattagacaacatctggct tcgaacataggggttgctaagagtcaaattcgtgaaaaaaagccgattgtctgggaaatc cttcaagaagttatgcaggggcatcccgtattactgaatagagcacctactctacataga ttaggcatccagtcattccaacccattttagtggaaggacgcactatttgtttacatcca ttagtttgtaaggggttcaatgcagactttgatggggatcaaatggctgttcatgtgcct ttatctttagaggctcaagcagaggctcgtttacttatgttttctcatatgaatctctta tctcccgctattggagatcccatttctgtaccgactcaagatatgcttattggactctat gtattaacgagcggtactcgtcgaggtatttgtgcaaacagatataatccatggaatcga aaaaactatcaaaatgaaataatttacgaaacaaactataagtatatgaaagaacccttt ttttgcaattcttatgatgcaattggagcttatcggcagaaaagaatcaatttagatagt cctttgtggcttcggtggcaattagatcaacgcgttattgcttcaagagaagttcctatc gaagttcactatgaatcttttggtaactatcatgagatttatgcacactatctaatagta agaagtgtaaaaaaagaaactttttgtatatatattcgaaccacagttggtcatatttct ttttatcgagaaatcgaggaagctatacaaggtttttctcaagcctgttcatatgatacc taa

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