Eutrema salsugineum (saltwater cress): EUTSA_v10006416mg
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Entry
EUTSA_v10006416mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Module
eus_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10006416mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
EUTSA_v10006416mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
18020209
NCBI-ProteinID:
XP_006402645
UniProt:
V4LW39
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MPSSLLIILLFLLSISLSSAQTYNILSYGAKPDGKTDSTKALTVMWAKACASVKPVTILI
PKGRFLLRSIVFDGAKCKRKSVTFRIKGTLVAPSDYRVLGKENYWIFFQHLDSLSVYGGV
LDAQGASLWSCKKSGKHCPSGATSIGFQSSSNVVISGLTSLNSQMFHVVINGCRNVNIQG
VKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSVGPGTNGLWIENVACGPGHGIS
IGSLGKESVEAGVQNVTVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI
VIDQNYCPGNENCPNQVSGIKISDVIFFDIHGTSAREVGVKFDCSSKKPCTGIRIQDVKL
TYQNKPAVVDCSHAGGTETGFQRSNSCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttcacttctcataattctcctctttctcctctctatctcattgtcctcagct
caaacctacaatatcctatcttacggagccaaaccggacggcaaaaccgactcgaccaag
gccttaaccgtcatgtgggccaaagcctgcgcctcggtcaaaccggtcaccattttgatc
cccaagggacggtttttattaagaagcattgtttttgatggagccaagtgtaaacgcaag
tccgtcacgttccgtatcaaaggcactcttgtggctccatcagattatcgagttcttggt
aaagaaaactattggattttcttccagcatctcgacagcctctccgtctacggcggagtt
cttgacgctcagggagcttctctatggtcttgcaaaaagtccggcaagcattgcccgagt
ggtgccacgagcatagggtttcagagctcaagcaacgtggtgatctcagggctgacgtca
cttaacagtcagatgtttcacgtcgtgattaacggctgccgtaacgtaaatattcaagga
gtaaaagtttcagctgacggaaacagtccaaacactgacggcatccacgtgcagtcatcc
tccaccgtctccatcctcaactccaaaatctccaccggcgatgactgtgtctccgtcggt
cccggaactaacggtctctggatcgaaaacgtcgcttgtggccctggccatggtatcagc
attgggagcttgggaaaggaaagtgtagaggcaggtgtacagaacgtaaccgtaaaaacg
gcgacgtttacaggaactgaaaatggagtaagaataaagtcatgggccaggcccagtaat
ggtttcgccaagaatatccgtttccaacattgcgttatgaacaacgtacagaacccaatc
gtcattgaccaaaactactgcccaggcaacgaaaattgccccaaccaggtctctgggata
aaaatcagcgatgtaatattcttcgatatacacgggacatcggcgagagaagttggagtg
aaatttgactgtagctctaagaaaccgtgtaccggaattcgaattcaagacgtgaagcta
acgtaccagaataaaccggcagtagtagattgtagccatgctggagggaccgagactggg
tttcaacggtccaatagctgtctatga
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