Eutrema salsugineum (saltwater cress): EUTSA_v10006552mg
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Entry
EUTSA_v10006552mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14303
nuclear pore complex protein Nup160
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10006552mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10006552mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10006552mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10006552mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10006552mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
NUP160_helical
Motif
Other DBs
NCBI-GeneID:
18991708
NCBI-ProteinID:
XP_006415089
UniProt:
V4KTT6
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MEEDRRSSPACIEVLVAGGGNVVKWIDISVPSPSPSSSIIGTNSSEDNGRVLLPSTEEDY
ASSCEIEETEISFIWKINKTSPNVLELLQLSAKSGFPMTGLRFVFAHNLSPFAFVFAEEG
SDSVSGRVVFFLYALTPSGVVYVLKLSNTQAYKSGSVFPLDHLIHLDVRPYLNETHVTSV
AASPGFLFLGRSDGCVSCLQPFVSPQKHSGFHQELRDDTGFGRLWGFVRHVLGAVIAAVQ
DLFISEVHGRKFIFVLHADGALRIWDILTYSRVLCQSIAAKNLEGVMCLRLWLGKADYDS
GIIPIAVLYRNSMGVSVDVITVYGLRFISGEGIAFSLDSGLQNIPMEGGELRDVRFTSDQ
IWILKADDLTSHMLCHISSDMEAHSYTLQEECIAEQLFLSSKSSSQELLLTTHSLFSSAK
EQIMGFISSLFLRRLLCPGIFHSDALRLTLMDHNKRWTDSEFQSLSLDELKSEILLLVEH
EVTGETSISVFHWWENFCTCYLHHWCNNNEPRTLLVQSDVIGLVRKSSVSLFFRLENAEH
SLGGFSMMTSLSLGMSHSEHEILLGVLKCTLKISKQWGGAPYAMYYESVTGKPVISSDEI
IFRLVDILESGYAMSIGQRTWSDLGADRAWEKELEAHKNLRLFSIDMLLSLSALCQRAGS
WEKVFTIMEHYLKYLVPKKFMNNNNGEALSDICSSILVHATSQFVKVMFESAFDIFILVS
YLLNISGQVNMSQQDICKLRLELLPMIQDIVSEWLIVHFFVNTPAESTSLEDFSFKLSSL
QIDSSIDKRSWNTVLGKCGFSLAHILIFSDRSCIVGSLSNLGYLPSSQIITHLVQNFISW
IRYSKRGEDSSSLLRRSTELILRLIRNGQTDAIERILGVVEASLRGEKTYGRAQDTSGDW
CLLQHLRGCCLLDQVQRGACEISRERKISDAIRCFFRASSGEGSWEALHSLSEEAGFSHS
TIGATVSDGIKSCATWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDEAINFMESSEN
VPLPVTATHSRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFECGK
TKILSDGHLPFIGLTEKITQELSWKAGRSDIMIKPNPYKLLYAYEMRRHNWRMAASYMYQ
FSARLRSEAASKDYIHMSLVLQERLNGLSAAINALSLVHPGYAWIDPLPEESMRYSVKKV
RREEEEEQLRSNAQTKGEQSCIDIEKLQNEFVFTTAEYLLFLKNFGWTYSGLEKPPSDLV
DLLVQANLYDMAFTVVLKFWKGSALKRELEKIFENMAIKCCPTKGTLWTSNDLRPNLMLT
STDEEVTHSPDRSPAVQGSKLAGDWEVLEVYLVSDF
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatcgtcggagttcgcctgcttgtattgaggttctggttgcaggcggcgga
aatgtcgtcaaatggatcgatatatctgtgccttctccttctccttcttcttccattatc
ggtactaattcaagtgaagacaatggtcgtgttctgctcccgtcgactgaagaagactat
gcctctagctgtgaaattgaggaaactgagatctctttcatttggaaaatcaacaagacg
agcccaaatgtccttgagcttcttcagctctctgctaagtcgggatttccaatgaccggg
ctgcgtttcgtctttgctcataatctctctccctttgcttttgtattcgccgaagagggt
agtgatagtgttagtggtcgagtcgtcttctttctttacgccctcacgccgtctggtgtt
gtctacgtccttaaactctcaaatacgcaagcctataagtctggctcagtcttcccgctt
gatcatctgattcacttggatgttcggccttacttgaacgaaactcatgtaaccagtgtc
gctgcatcccctggcttcctttttcttgggagatctgatggttgtgtctcttgcttacaa
ccttttgtgtctcctcagaaacattcaggtttccaccaggagctgcgtgatgatacagga
ttcggtcgtctatggggatttgtaaggcacgtcttgggggcagttattgcagcggtgcaa
gatttatttatatcagaagttcatgggagaaagtttatatttgtgcttcatgctgatggg
gcattacgtatctgggatatcttgacttatagcagggttttgtgtcagagtatagctgct
aaaaaccttgagggggttatgtgtctgaggttatggttgggaaaagctgactacgactct
ggcatcattccaatagctgtattgtatagaaatagtatgggtgtcagcgtggacgtgatc
actgtatatggcctgcgctttatttctggggaggggatagctttttcactggattctgga
ttacagaatattccaatggaagggggggaattgcgggatgtaagatttacttccgaccag
atctggattctaaaagccgatgatttgacatctcacatgttgtgccatatatccagcgac
atggaagcacactcttacactttgcaggaagaatgcattgctgagcagctatttttaagt
tctaagagctcttcacaggagcttcttttgacaacgcattcactgttttcatccgcaaag
gagcaaattatgggattcatttcatcactcttcttacgcaggcttctttgtcctggaatt
tttcacagtgatgccttgcgtctaacattaatggaccacaacaaacgctggactgattct
gagtttcaatctttaagtcttgatgagcttaaaagcgagattcttttactggttgagcat
gaggttactggtgaaacttctatttcagtgtttcactggtgggaaaacttttgtacatgt
tatctccatcattggtgcaacaataatgaacctcggacgttgctggttcagtcagatgtt
attggtttagttagaaagagttctgtatcgttgttctttagattagagaatgctgagcac
agccttggaggattcagcatgatgacaagcttaagcttgggcatgtctcacagtgaacat
gagattctgttgggggtactgaaatgtactttgaagatcagtaagcagtggggcggtgct
ccatatgccatgtattatgaatcggttactggaaagccagttatctcatcggatgaaata
attttccgattagttgacatccttgagtcgggatatgctatgtccataggtcagcgtacg
tggtcggatcttggtgctgatagagcatgggaaaaagaattagaagctcataaaaatctt
agattgttctccattgatatgttattgtctctctctgctctatgtcaaagggctggatct
tgggaaaaggtttttactatcatggagcactatttgaagtatctggtccctaagaaattt
atgaataacaataatggtgaggcattatctgatatctgtagttctatcctcgtccacgcc
acttctcagtttgtgaaggtgatgtttgagtctgcctttgacatcttcatactcgttagc
tatctgcttaacatctcagggcaggttaatatgtcacagcaagacatatgcaagctacgg
ctggagttgctcccgatgatccaagatattgtctcagagtggctcattgtccatttcttt
gttaacactccggccgagtcgacgtcattggaagatttcagctttaaactctcatctcta
cagattgatagcagcattgacaaaagatcatggaacacagtgctgggaaaatgtggtttc
tcattggcgcatattcttatttttagtgaccgaagttgcattgtgggaagcctatctaac
ttgggatatcttccaagttcacaaatcattacacatttggtacagaactttattagctgg
attcgttatagtaaaagaggagaggactcttcgtcacttctaagacgctcaactgagctt
attcttaggttaataaggaatggacagactgatgctattgagcgaatccttggggttgtg
gaggcaagtttgcgtggggagaaaacatatggacgtgctcaagatactagtggagattgg
tgtcttcttcaacatctgcgtggttgttgcctccttgatcaagtacaacgtggagcctgt
gagatatcaagagagaggaagattagtgatgccatccgctgcttcttcagagcttcatca
ggtgaaggatcttgggaggccttgcacagcttgtctgaagaagcaggattttcgcattcc
acaattggtgccactgtttcagatggtataaagtcttgtgcgacatggaaacttcattac
tatgaatgggcaatgcaaatttttgaacgttacaatataagtgaaggagcttgtcagttt
gcctatgcagcccttgagcaagtagatgaggccattaatttcatggaaagtagtgagaac
gtccctctacctgtaacagccacccacagtagaggacgactgtgggcaaatgttttcaag
ttcaccttagacctgaatctcctgaatgatgcttactgtgctataatttcaaaccctgat
gaggagattaagcgcatctgtttgaggcgcttcataatagttctatttgaatgtggcaaa
acaaagatcctcagtgatggacatctacctttcatcggcttaacagagaagatcacccaa
gagctatcttggaaggccggccgttctgatataatgattaagccaaatccatacaagcta
ctttatgcttatgagatgagacgacacaattggcgaatggcagcaagttacatgtatcag
ttttctgctcgtctgagaagcgaggcagcatctaaggattacatacacatgtccctagtt
ttgcaagagaggctcaatggactttctgctgctataaatgcattaagtcttgttcatcct
gggtatgcttggatagatccactaccagaagaatccatgcgttattcagtgaaaaaggtt
agaagagaagaagaagaagaacaattaaggagtaatgcccagaccaaaggggagcagagt
tgcattgatatcgagaaactccaaaacgagtttgtttttactacagcagaatatctgctt
tttctgaaaaatttcgggtggacatattcaggacttgaaaagccaccatcggacttggtt
gaccttcttgtccaggcaaacttgtatgatatggcattcactgttgttttaaaattttgg
aaagggtcagctttgaaaagggagctggaaaagatatttgagaatatggcaattaaatgt
tgccctactaaaggaacgctgtggacatcaaatgatctcaggcctaatcttatgttaaca
tctacggacgaagaagttactcattcgcctgatagaagccctgctgttcagggctctaag
ttggctggtgactgggaagttcttgaggtttatcttgtgagtgacttctga
DBGET
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