Eutrema salsugineum (saltwater cress): EUTSA_v10006888mg Help Entry EUTSA_v10006888mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K10844   DNA excision repair protein ERCC-2 [EC:5.6.2.3] Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus03022   Basal transcription factors eus03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:eus00001]  09120 Genetic Information Processing   09121 Transcription    03022 Basal transcription factors     EUTSA_v10006888mg   09124 Replication and repair    03420 Nucleotide excision repair     EUTSA_v10006888mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:eus03021]     EUTSA_v10006888mg    03400 DNA repair and recombination proteins [BR:eus03400]     EUTSA_v10006888mg Enzymes [BR:eus01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      EUTSA_v10006888mg Transcription machinery [BR:eus03021]  Eukaryotic type   RNA polymerase II system    Basal transcription factors     TFIIH      EUTSA_v10006888mg DNA repair and recombination proteins [BR:eus03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TFIIH complex      EUTSA_v10006888mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD_2 HBB Helicase_C_2 ResIII DEAD SNF2-rel_dom AAA_11 Motif Other DBs NCBI-GeneID:  18994537 NCBI-ProteinID:  XP_006418256 UniProt:  V4KZ34 LinkDB All DBs Position Unknown AA seq 758 aa AA seqDB search MIFKIEDVTVYFPYENIYPEQYEYMVELKRSLDAKGHCLLEMPTGTGKTIALLSLITSYR LSRPDSPIKLVYCTRTVHEMEKTLAELKLLHEYQVRHLGSQAKILAIGLSSRKNLCVNPK VLAAENRDSVDAACRKRTASWVRALSAENPNVELCDYFENYEKAAENALLPPGVYTLEDL RTFGKNRGWCPYFLARHMVQFANVIVYSYQYLLDPKVAGIISKELQKETVVVFDEAHNID NVCIEALSVSVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSG TDQWLANPALPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGGRLDTDNVEKESPVSFVSS LNSQAGIEQKTLKFCYDRLQSLMLTLEITDTDDFLPIQTVCDFATLVGTYARGFSIIIEP YDERMPHIPDPILQLSCHDASLAIKPVFDRFQSVVITSGTLSPIDLYPRLLSFNPVVSRS FKMSMTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFV SYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVA RGKVAEGIDFDRHYGRLVVMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREF LRKMAQPYDKAGTMGRKTLLTQEDLEKMAETGVQDMAY NT seq 2277 nt NT seq  +upstreamnt  +downstreamnt atgatcttcaagatcgaagacgttactgtctacttcccttatgagaacatatatccagaa caatacgaatacatggtggaattgaagcgatccctagacgccaagggacattgtcttctc gagatgcccaccggaactggcaaaaccattgcccttctctcccttatcaccagttaccgg ctctctcgtcccgattctccgatcaagcttgtctactgcactcgtaccgtccacgagatg gagaaaacgcttgctgagcttaagctactccacgaataccaagtacgccatctcggctct caggcaaagatccttgccatcggtctttcctcccggaagaacctttgcgttaatcctaag gttttagcggcggagaatcgtgattccgtcgatgcagcgtgtaggaaacggacggctagt tgggttagggctttgtcggcggagaatccaaatgtagaactctgtgactactttgagaac tacgagaaggctgctgagaatgcgttattgcctcctggtgtttatactttagaggattta aggacgtttggtaagaatcgaggatggtgtccttacttccttgcgaggcatatggttcag ttcgccaacgttattgtttatagctaccagtacttgcttgatcccaaggttgctggaatt atatccaaggagttacagaaggagacagttgtagtgtttgacgaggcgcataatatagat aacgtgtgtattgaagcactcagcgtcagtgtgaggagggttacactcgaaggagctaat cgaaatcttaataagattaggcaagaaattgataggttcaaggctacagatgcaggaaga ttgcgagctgaatacaatcggctggttgagggtttagcactgagaggggacttatctgga actgatcaatggcttgcaaaccctgcactgccccatgatattctaaaggaggctgtccca ggaaatattagacgggctgagcattttgtgcatgttttacgccgattacttcagtacttg gggggacggctggatactgacaacgtggagaaagaaagccctgttagctttgtatcgtcg cttaattctcaggctggaattgagcagaaaacactgaagttctgctatgaccggctccag tctctcatgttaactcttgaaattacagatacagatgatttcttgcctatccagacagtg tgcgattttgcaactcttgttgggacatatgcaaggggcttttccatcatcattgagcct tatgacgagagaatgccccatattccagatcctatattgcagttgagctgtcatgatgcg tctctggctataaaaccggtgtttgatcgcttccaatcagtagttattacatcaggcacc ctgagccctattgatctgtatccccgacttcttagtttcaatcctgttgttagtcgaagc tttaagatgtcaatgacacgagactgcatctgccctatggttttaactcgaggaagtgat cagcttcctgttagcaccaaatttgacatgagaagtgatcctggggttgtcaggaattat ggaaagtttttggtggagatggtatctattgttcctgatggagttgtctgcttctttgtt agttactcatacatggatgggattattgctacttggaatgaaactggaattctgaaggaa ataatgcaacagaaacttgtcttcattgaaacgcaagatgttgtagaaacaacattggca ctggacaattatcgtagggcctgcgattgcggacgaggtgcagttttcttctctgtagcc aggggaaaagttgctgaaggtattgattttgatcgtcattatggaagactggttgtcatg tttggagtaccttttcaatatacattaagcaagatattactagcaagattggagtatttg cgtgatacatttcagattaaagaaggcgatttcctaacttttgatgccttgaggcaagca gctcaatgtgtaggacgagtaatccggtcaaaggctgattatggaatgatgatatttgca gacaagagatatagccgtcatgataagcggtccaaattacccggttggatactttcacat ctacgtgatgcgcacttgaatctaagcactgacatggctatccacattgctcgagagttt ctaaggaaaatggctcaaccgtacgataaggcgggtactatgggcaggaaaactctgtta acacaagaagatttggagaagatggctgagacgggtgtgcaagacatggcttattag

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