Eutrema salsugineum (saltwater cress): EUTSA_v10012647mg
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Entry
EUTSA_v10012647mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
EUTSA_v10012647mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10012647mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
EUTSA_v10012647mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
TOR1L1_N
Ipi1_N
PDS5
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
18016512
NCBI-ProteinID:
XP_006399106
UniProt:
V4LA97
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MVRSKAPAKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIILPEQSVGAEKSGLA
TSKKGLTLKELLQQTSHHNAKVRKDALHGIEDLFRHHPAELQSHKCAIIEKLRERIRDDE
ESVRDAFCALFKSKIFPACIEGPMVSLLMPYIFSAMAESAIDVRLMAFKFFHLVVEYYPP
TFSLYAEKILENYKDIIQKNHFYVQDKSKLKVALSGLAHCLSLLPCDESDTESQKKGNFQ
NETLLAYEQDAAKECVRFAHVPGRLKEIVGILINCFQDFIPLIHAPRGFDEKSYDCIRHI
LCSISYAIKFSIRRYIQRQTICLPASVDVTLMILDQDIASMLSKKLLGSFPLNPENNLSG
KGDERYFVLNSVLTEIFLEVSEWSHLPTDLCNRFLEFIENTLLGKITRSNRIRKSSQEKT
SLALLPFVPKLILRVDPDWRDNLLQAFTIAFNDCKPESPLTLACISIVRDVIIPNGDILY
PSASDSTVNNYQSAWVNKLPSLLNQLGDKYPLSTQAVLQLLLDLGRVGCLNASPTFEEDI
RNFFNPCQGEGDVSGGAFASLPREVQDLALSFLYYFTIDNFSSPMLDSIVSCCLYPQLEQ
AVLYRIVEILHTAYRAGYIQITDHFSFLITLIARFKVVSEKGQLAMECNVQETYRGTLKV
LTNLVCSCLSEMGDGSLVLQILEKVLLEQIILKPALDNGCAILRMICALDSKPTRLSESS
IATLSDFLPGYLIEIVNCIPEDKENSYQYNQTCLYYLVPCYFLFDRSSKLTEQVLKRMQS
MVSENTQALESVQDKESGQNSLKLIHCIVSVILLMHNDVKVRKIILSSKSELDLILQNVV
SLQSSGSSSLTVEGKHMMKFKGERLKFACNSLLTL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctcgaaagctcctgcaaagaagcagcaaaagaaaggaattgattttaagaaa
attaagagaaagctcgggaggaaattacctccaccaaagaatgccactaatacagagatt
aaatccaaagcaattatacttcctgagcaaagtgtgggagcagaaaagagtggcttagct
acgagtaagaaaggattgaccttgaaggagcttctgcaacaaacttcccatcacaatgcc
aaagttcgcaaagatgcgttacatggcatcgaagaccttttcaggcatcatccagctgag
ctgcagtcacataaatgtgctatcatagagaaacttagggaacgcattagagatgatgaa
gagtcagtgagagatgctttctgtgcactatttaaatctaagatctttcctgcttgtata
gagggcccgatggtgtcacttttgatgccatacatatttagcgctatggctgaatctgca
attgatgttcgtttgatggctttcaaattcttccaccttgttgtggagtactacccgcct
accttttccttgtatgctgaaaagattctcgaaaactacaaggatatcattcagaaaaac
catttctatgtgcaagataagagtaagctaaaggtagcactttctgggttggcacactgc
ctgtcgctgttgccatgtgatgagagtgacaccgaatcacagaaaaagggaaattttcag
aatgaaacgctactggcctatgagcaagatgctgcaaaagaatgtgttcgttttgcccat
gtccccgggagattgaaggagattgttggaatcttaatcaactgtttccaagatttcatt
ccattgattcatgctccgcgaggcttcgatgaaaaatcctatgattgtatacgccatata
ctttgcagcataagttatgcaatcaagttttcaattcgtaggtacattcaaagacagact
atatgtctacctgcatcggtggatgttactctgatgatattggatcaagacattgcatca
atgttatcgaaaaagttacttggctctttcccccttaatccagagaacaatctttctgga
aagggtgatgaaaggtacttcgtcctcaatagcgtattgacagaaatatttttggaagta
agtgaatggagccaccttcctactgatctttgcaatagatttctggaatttattgagaat
acactactaggcaagatcaccaggagcaataggataagaaaatctagtcaagaaaagact
tcacttgcactgttgccctttgttccaaaacttattttgagggtggacccggattggaga
gataatcttctgcaggcatttactattgccttcaacgattgcaaaccagagtctccgctt
acgttggcctgtatttcaatcgttagagacgtgattatccctaatggagatatcctttat
cccagtgcaagtgattcaacagtaaataactaccagagtgcttgggtcaacaaacttcca
tcgctgctaaatcagctgggtgataaatatcctttatctacgcaggctgttttgcaactt
ttgcttgaccttgggcgagttggatgtctgaatgcttcccccacatttgaagaagacatc
agaaacttcttcaacccttgtcagggagaaggtgatgtgtctggtggggcttttgcaagt
ctccctagggaagtccaagacttggctctctcttttctttactacttcacgatagacaat
tttagttctcctatgctggattcaatagtttcatgctgtctatatccacaacttgaacaa
gctgtgttgtatcggatagtggaaattcttcacactgcctatagagctggatatatccag
attacagatcatttcagcttcctcatcaccttaattgcacgttttaaagttgtttcagag
aaaggccagttagcgatggagtgtaatgtgcaggagacatatcgtggcacattaaaagta
cttacaaaccttgtgtgctcttgtttgtcagaaatgggtgatggctctctcgtcctccag
attctagagaaagttttactcgaacaaataattctgaagcctgcgttggacaatggatgt
gccatactcaggatgatatgtgcgttggactctaaacctactagactttctgaaagtagc
atagctactctaagtgattttttaccgggatatctgatcgagattgtcaattgtatacca
gaagataaggagaactcttaccaatacaatcaaacatgtctctactatttagtaccttgc
tatttcctgttcgaccggagctccaaactcacagaacaagttctcaaaagaatgcaatcg
atggttagtgaaaacactcaagcgctggaatctgtccaggacaaagaaagcggtcaaaac
tcattgaagttgatacactgcattgtctctgtgatcctgctgatgcacaacgatgtcaaa
gttaggaagatcatattgtcatccaagtcagagttagatttgattctgcagaacgttgtt
tccttacagtcctctggaagcagtagcttgacggtagaaggaaaacatatgatgaaattt
aaaggagagcgacttaagtttgcatgcaatagcttacttactttataa
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