KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10016009mg
Entry
EUTSA_v10016009mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10839  UV excision repair protein RAD23
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03420  Nucleotide excision repair
eus04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    EUTSA_v10016009mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10016009mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:eus03051]
    EUTSA_v10016009mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10016009mg
Proteasome [BR:eus03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    EUTSA_v10016009mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      EUTSA_v10016009mg
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Lipid_bd
Other DBs
NCBI-GeneID: 18017366
NCBI-ProteinID: XP_006400141
UniProt: V4LD35
LinkDB
Position
Unknown
AA seq 319 aa
MQRSLQTVQFSWIDGYVSQVADVKKKIETVMGVSEYPAAQQMLIHKGKVLKDETTMEANN
VADKSCIAITKSKPTSLGASSASVGRKAQGIPEQTQEPAAPPAGDPNGFYYLPQFQILRP
LVQFDRSVIKGILEEIEKENPPLARMIRENRADFLRLINGEPLEEGRASGKQMEQSEERE
VKVTAEEYESIERLQVYNIQDKTESEEMEVKVTAEEYEIIERLEALGFERGEAAVAFFVC
NKNEDLAANHLLDDHIHDFQDKTESGEWEVTAEEYESIERLEALGFERGEVVVAFFACNK
DEDLAANYLLDHHIHDFQD
NT seq 960 nt   +upstreamnt  +downstreamnt
atgcagagaagtttgcaaactgtgcagttttcatggattgatggttatgtatctcaggtt
gctgatgtgaagaagaaaatagagactgtgatgggagttagtgaataccctgctgcacaa
cagatgcttattcataaagggaaagtgcttaaagacgaaacaacaatggaggctaacaac
gttgctgataaaagctgtattgccattacgaagagtaaacctacatctcttggagcgtct
tctgcatctgttggccgtaaagctcagggcatcccggagcagactcaagaacctgcagct
cctccagcaggagacccaaatgggttttattatttgccgcagttccagattcttcgacct
ctggtgcagtttgaccgtagtgtcataaagggaattctagaggagatagagaaagagaac
ccgcctctggctcggatgattcgagagaacagagccgacttcttacgcttaataaatggg
gaaccacttgaagaaggaagagcaagtggcaagcaaatggaacagtctgaggaaagggaa
gtcaaagttacagctgaggagtatgaatcaatcgaacggcttcaagtatataatattcaa
gacaaaacagagtctgaggaaatggaagtcaaagttacagctgaggagtatgaaataatc
gaacggctggaagcattggggttcgagagaggtgaagcggcggttgcgttcttcgtctgc
aacaagaacgaagacttggctgcaaaccatcttctcgatgatcacatccacgactttcaa
gacaaaacagagtctggggaatgggaagtcacagctgaggagtatgaatcaatcgagcgg
ctggaagcattggggttcgagagaggtgaagtggtggttgcgttcttcgcctgcaacaag
gacgaagacttggctgcaaactatcttctcgatcatcacatccacgactttcaagactaa

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