Eutrema salsugineum (saltwater cress): EUTSA_v10016138mg
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Entry
EUTSA_v10016138mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12874
intron-binding protein aquarius
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10016138mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10016138mg
Spliceosome [BR:
eus03041
]
Complex B
Other components
Prp19-related factors
EUTSA_v10016138mg
Complex C
EUTSA_v10016138mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD_C_2
UvrD-helicase
ResIII
AAA_22
SLFN-g3_helicase
AAA
AAA_16
DUF1494
Motif
Other DBs
NCBI-GeneID:
18026676
NCBI-ProteinID:
XP_006411102
UniProt:
V4LPT1
LinkDB
All DBs
Position
Unknown
AA seq
1509 aa
AA seq
DB search
MTKVYGTGTYDFKRHRVAEYPLELPNHPTEKPLESKPGSNLPSSITLSEIQQDRLTKIAE
ETWIKTGGKLPEKPFDPEVVKEIYVTELKVTSGRKPVPLQRVMILEVSQYLENYLWPNFD
PETATFEHVMSMILMINEKFRENVAAWICFHDREDLFKEFLQKVLRLKEGRDLTIAEKTN
YLVFMINAFQSLEDSVVNETVLSLAGLQSWHSLSYGRFQMELCLQPDLIKKWKRSSKKWA
AEAMSKGEQFDPSSLPEANFVRGLIEEFVEVLDHRVFADEVDDTVGSHLVDDSSVLYCER
FMEFLIDMLNQLPTRRYLRPLVADIAVVAKCRLSVLYKHEKGKLFAQLVDLLQFYEKFEI
KDHDGTQLTDDEALQFHYDRFMAFQLLAFKKIPKLRDLSLANIGSVHKSSDLRRRLSALS
LEDLRDVVCSKLKLVSRHDPWADSKDFLIEVVVSSFEKQQSQKEAINALPLYPNEQIMWD
ESVIPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAH
INNEGETAFRGWSRMAVPINKFQIAQVKQPNIGEEKPSSVTAEVTFSIKSYRNQIRSEWN
SLKEHDVLFLLCIRPSFEPLGAEEADKATVPQRLGLQYVRGCEIIDIRDEEGNLMNDFTG
RVKRDEWKPPKGEMRTVTVALDAAQYHIDVTDIAEKGAEDVYSTFNVLMRRKPKENNFKA
ILESIRDLMNEYCIVPEWLHNVFLGYGNPSAAQWPNMPNLLETVDFKDTFLDANHLSESF
PDYEVSFVNADGAEVLDPRPPFRITLPKTLKGNANALSGNKISEVNPADNVDAVDVSPKE
KLIVEAYTPPDPGPYPQDQPKQNSVKFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQ
ILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDLDFSRQ
GRVNAMLVRRLELLNEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWELFLAACAGNE
NNPSFVQDRFPFKDFFSDTPKPVFSGESFEKDMRAAKGCFSHLKTVFQELEECRAFELLK
STADRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLL
QRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGR
ARPSLAKLYNWRYRDLGDLSIVKEAPIFHRANAGFSYEYQLINVPDYEGKGESTPSPWFY
QNQGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYAFIGPPSKVT
TVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYELQP
TFQLLLKRPDRLGLNLSENTTAYTDRAVEEVGNPYLVHDAQEMAHIVHDRINEFYKAQGV
YEQYQNYMPQIEDGNQDMESDAAVGADGESEKKMQPDLDGVADDESSKEVVGMEVDNGFS
SENGKADEN
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggtctatggaacaggcacgtacgacttcaagcgccacagagtggccgagtat
ccactggagttacctaaccatcccactgagaagccccttgagtccaagcctggatccaat
ttgccgagctccatcactctatcggagattcagcaagaccggttgacgaagattgccgag
gagacttggattaagaccggcggcaaactgcctgagaaaccgttcgatccggaagttgtc
aaggagatttatgtgacggagctcaaggttacgagtggtcggaaaccggttccgctgcag
cgagtcatgattctggaagtgagtcagtacttggagaactatctatggcccaatttcgat
cccgagacggccactttcgagcatgtcatgtccatgattcttatgattaacgagaagttc
cgggagaatgtggcagcgtggatttgctttcatgatcgcgaagatctattcaaagagttt
cttcagaaggttcttcgtcttaaagagggaagagacttgactattgctgagaagacaaat
tatttagtcttcatgatcaatgcattccagagtttggaagactcggtggttaatgagact
gttctaagtctagcaggattacagtcttggcacagtttgtcttacggacgtttccagatg
gagctctgccttcaacctgatctaataaaaaaatggaagaggtcatcaaagaaatgggca
gctgaggcaatgtcaaagggagagcaatttgatccatcctcattacccgaagcaaatttt
gttcgaggcctaattgaagaattcgtcgaggtgcttgatcacagggtttttgcggatgag
gttgatgacactgttggatctcatttggtcgatgattcttctgtcttatattgcgagaga
ttcatggaatttctcattgatatgctgaaccaacttccaacaagaagatacctaagacct
cttgtggcggacatagcagtagttgcgaaatgtcgactgagtgtcctatacaaacatgaa
aaagggaagcttttcgcccaattagttgacttgttacagttctacgaaaagtttgagatt
aaggatcatgatggaacacaattaactgatgatgaagcacttcagtttcattacgatcgt
tttatggcgtttcagctacttgcctttaagaaaataccgaagttgcgagatctgtctttg
gctaacattggttcggttcataagagttctgatcttcggaggagattgtcggcgctttct
cttgaagatttaagggatgtcgtctgttcaaagctcaaactggtttcaagacatgatcct
tgggcagatagtaaggattttctgattgaggtcgttgtctcctcttttgagaagcaacag
tctcagaaagaagccataaatgctctgcctttgtacccaaatgagcaaatcatgtgggac
gaaagtgttattccaagcattaactattctggggaaggttgccttgctcttccaaagctt
aatcttcagtttctaacactccatgattacctcctcagaaacttcaatctcttccgtcta
gagtctacctatgagatacgtgaagatatacaagaagctgtaccacatcttcttgcgcac
ataaataatgagggagaaactgcttttcgtggttggtcacgaatggccgttccgattaat
aaattccaaattgctcaggtgaaacagcctaatattggcgaagaaaagccatcatctgtg
actgcagaagttaccttcagtattaagagttacagaaatcagatacgatctgaatggaat
tcccttaaagagcatgatgtactgtttttgctttgtatacgcccttcatttgagccatta
ggtgcagaagaagctgataaagctacagtaccacagaggctcgggctccagtatgttcgt
ggttgtgaaatcatcgatatccgcgatgaggagggtaatctgatgaatgattttactgga
agagttaaacgggatgagtggaagcccccaaaaggtgaaatgaggactgtgactgttgct
ttagatgctgcacagtatcacatagatgttacagacattgctgaaaaaggtgccgaagac
gtgtatagcacatttaatgtgctaatgaggaggaaaccaaaagagaacaacttcaaggct
attctggaatctatcagagatctcatgaatgaatattgtattgttccggagtggttgcat
aatgtttttctgggatatggcaacccttctgctgcacagtggcctaatatgccaaaccta
ttggaaaccgtggacttcaaagatactttccttgatgcaaatcatctcagtgaaagtttt
ccagattacgaggtgtctttcgtcaatgctgatggtgctgaagttctggatccaaggcct
ccgtttcgaatcactcttccaaagacactaaaagggaatgctaatgctctttctggaaat
aaaatatctgaagtaaatccagcagacaatgttgatgcggtggatgtttccccgaaggag
aaacttattgtcgaagcatataccccacctgacccagggccttaccctcaggatcagccg
aagcagaactcagttaaatttacgcctacacaggttggagcgattatctctggtattcag
cctgggctaactatggtggttggtccaccgggtaccggaaagacagatacagcagtgcaa
atcttaaatgttctatatcacaattgtccttctcaaaggaccttaattatcactcattca
aatcaagctttgaatgatctttttgagaagataatggagagggatgtaccagcgcggtat
ctacttcgtttgggtcagggtgaacaagagcttgccactgatcttgactttagcagacaa
ggccgtgtcaatgccatgcttgttcgacgtttagaactgctcaacgaggttgagagacta
gcaagatctcttcaacttccagaggatgtaggttatacttgtgaaacagctgggtatttc
tggttgcttcatgtatactcacgttgggagctatttcttgctgcttgtgctggaaatgaa
aacaatccatctttcgttcaagatcgcttcccgttcaaggatttcttctcagacacccct
aagcctgtttttagtggggagtcatttgagaaagacatgagggcagctaaaggttgtttc
tctcatctcaagactgtgttccaagagctagaagagtgtagggcctttgaactactaaag
tcaactgctgatagagcaaattacctgatgaccaaacaagcaaagatagtagcaatgacg
tgtactcatgcggcattaaagaggagagattttcttcagttggggttcaagtatgataac
ttattgatggaagaaagtgctcagattttggaaattgagacattcataccaatgttgctt
cagaggcaagaagatggtcatgcacgactcaagcgctgtatattgattggtgatcaccac
cagctgcctcctgtggtgaagaatatggctttccagaaatatagtcacatggatcagagt
ttgtttacgaggtttgttcgtcttggtatcccatatattgagcttaacgctcaaggaaga
gccaggccaagcctagctaagctgtacaactggagatacagagacttgggagacctttcc
attgttaaggaagcacccatatttcacagagcgaatgctggattctcatatgagtatcag
ttgattaatgtgcctgattacgaggggaaaggagagtcgacaccatctccatggttttat
caaaatcaaggagaagctgaatatattgtcagtgtctatatatacatgagattgctagga
tatcctgctaacaagatatccatattgacgacatataatgggcaaaagctcttaatccgt
gatgttatcaaccgtcgatgtgttccctatgctttcatcggcccgccaagcaaggtgact
acagtggacaagttccaaggacaacagaatgattttattctgctgtctctcgtacggaca
aggtttgttggacatttacgtgatgtaagaaggttggtagttgcaatgtcacgtgctcgg
ctcggtttgtatgtgttctgccgacgatctctctttgaacaatgctatgaactgcaacca
acgtttcaacttcttctgaaaagacccgatcggctaggcctcaatctgagtgagaacaca
acagcttatacagatcgcgccgtcgaggaagttggaaatccttatcttgtccatgatgct
caagagatggcacacattgttcacgataggatcaacgagttctacaaggcacaaggcgtg
tatgagcaataccagaattacatgccacaaatagaagacggtaatcaggacatggagagt
gatgcagctgtaggtgcagatggtgaatctgagaagaagatgcagccagacttagacggc
gtagctgatgatgaatcatcgaaggaagtggttggaatggaggtggacaatggatttagc
agtgagaatggaaaggctgacgagaattag
DBGET
integrated database retrieval system