KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10016138mg
Entry
EUTSA_v10016138mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12874  intron-binding protein aquarius
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10016138mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10016138mg
Spliceosome [BR:eus03041]
 Complex B
  Other components
   Prp19-related factors
    EUTSA_v10016138mg
 Complex C
    EUTSA_v10016138mg
SSDB
Motif
Pfam: Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 AAA_30 UvrD_C_2 UvrD-helicase ResIII AAA_22 SLFN-g3_helicase AAA AAA_16 DUF1494
Other DBs
NCBI-GeneID: 18026676
NCBI-ProteinID: XP_006411102
UniProt: V4LPT1
LinkDB
Position
Unknown
AA seq 1509 aa
MTKVYGTGTYDFKRHRVAEYPLELPNHPTEKPLESKPGSNLPSSITLSEIQQDRLTKIAE
ETWIKTGGKLPEKPFDPEVVKEIYVTELKVTSGRKPVPLQRVMILEVSQYLENYLWPNFD
PETATFEHVMSMILMINEKFRENVAAWICFHDREDLFKEFLQKVLRLKEGRDLTIAEKTN
YLVFMINAFQSLEDSVVNETVLSLAGLQSWHSLSYGRFQMELCLQPDLIKKWKRSSKKWA
AEAMSKGEQFDPSSLPEANFVRGLIEEFVEVLDHRVFADEVDDTVGSHLVDDSSVLYCER
FMEFLIDMLNQLPTRRYLRPLVADIAVVAKCRLSVLYKHEKGKLFAQLVDLLQFYEKFEI
KDHDGTQLTDDEALQFHYDRFMAFQLLAFKKIPKLRDLSLANIGSVHKSSDLRRRLSALS
LEDLRDVVCSKLKLVSRHDPWADSKDFLIEVVVSSFEKQQSQKEAINALPLYPNEQIMWD
ESVIPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLLAH
INNEGETAFRGWSRMAVPINKFQIAQVKQPNIGEEKPSSVTAEVTFSIKSYRNQIRSEWN
SLKEHDVLFLLCIRPSFEPLGAEEADKATVPQRLGLQYVRGCEIIDIRDEEGNLMNDFTG
RVKRDEWKPPKGEMRTVTVALDAAQYHIDVTDIAEKGAEDVYSTFNVLMRRKPKENNFKA
ILESIRDLMNEYCIVPEWLHNVFLGYGNPSAAQWPNMPNLLETVDFKDTFLDANHLSESF
PDYEVSFVNADGAEVLDPRPPFRITLPKTLKGNANALSGNKISEVNPADNVDAVDVSPKE
KLIVEAYTPPDPGPYPQDQPKQNSVKFTPTQVGAIISGIQPGLTMVVGPPGTGKTDTAVQ
ILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELATDLDFSRQ
GRVNAMLVRRLELLNEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWELFLAACAGNE
NNPSFVQDRFPFKDFFSDTPKPVFSGESFEKDMRAAKGCFSHLKTVFQELEECRAFELLK
STADRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLL
QRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNAQGR
ARPSLAKLYNWRYRDLGDLSIVKEAPIFHRANAGFSYEYQLINVPDYEGKGESTPSPWFY
QNQGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYAFIGPPSKVT
TVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYELQP
TFQLLLKRPDRLGLNLSENTTAYTDRAVEEVGNPYLVHDAQEMAHIVHDRINEFYKAQGV
YEQYQNYMPQIEDGNQDMESDAAVGADGESEKKMQPDLDGVADDESSKEVVGMEVDNGFS
SENGKADEN
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgacgaaggtctatggaacaggcacgtacgacttcaagcgccacagagtggccgagtat
ccactggagttacctaaccatcccactgagaagccccttgagtccaagcctggatccaat
ttgccgagctccatcactctatcggagattcagcaagaccggttgacgaagattgccgag
gagacttggattaagaccggcggcaaactgcctgagaaaccgttcgatccggaagttgtc
aaggagatttatgtgacggagctcaaggttacgagtggtcggaaaccggttccgctgcag
cgagtcatgattctggaagtgagtcagtacttggagaactatctatggcccaatttcgat
cccgagacggccactttcgagcatgtcatgtccatgattcttatgattaacgagaagttc
cgggagaatgtggcagcgtggatttgctttcatgatcgcgaagatctattcaaagagttt
cttcagaaggttcttcgtcttaaagagggaagagacttgactattgctgagaagacaaat
tatttagtcttcatgatcaatgcattccagagtttggaagactcggtggttaatgagact
gttctaagtctagcaggattacagtcttggcacagtttgtcttacggacgtttccagatg
gagctctgccttcaacctgatctaataaaaaaatggaagaggtcatcaaagaaatgggca
gctgaggcaatgtcaaagggagagcaatttgatccatcctcattacccgaagcaaatttt
gttcgaggcctaattgaagaattcgtcgaggtgcttgatcacagggtttttgcggatgag
gttgatgacactgttggatctcatttggtcgatgattcttctgtcttatattgcgagaga
ttcatggaatttctcattgatatgctgaaccaacttccaacaagaagatacctaagacct
cttgtggcggacatagcagtagttgcgaaatgtcgactgagtgtcctatacaaacatgaa
aaagggaagcttttcgcccaattagttgacttgttacagttctacgaaaagtttgagatt
aaggatcatgatggaacacaattaactgatgatgaagcacttcagtttcattacgatcgt
tttatggcgtttcagctacttgcctttaagaaaataccgaagttgcgagatctgtctttg
gctaacattggttcggttcataagagttctgatcttcggaggagattgtcggcgctttct
cttgaagatttaagggatgtcgtctgttcaaagctcaaactggtttcaagacatgatcct
tgggcagatagtaaggattttctgattgaggtcgttgtctcctcttttgagaagcaacag
tctcagaaagaagccataaatgctctgcctttgtacccaaatgagcaaatcatgtgggac
gaaagtgttattccaagcattaactattctggggaaggttgccttgctcttccaaagctt
aatcttcagtttctaacactccatgattacctcctcagaaacttcaatctcttccgtcta
gagtctacctatgagatacgtgaagatatacaagaagctgtaccacatcttcttgcgcac
ataaataatgagggagaaactgcttttcgtggttggtcacgaatggccgttccgattaat
aaattccaaattgctcaggtgaaacagcctaatattggcgaagaaaagccatcatctgtg
actgcagaagttaccttcagtattaagagttacagaaatcagatacgatctgaatggaat
tcccttaaagagcatgatgtactgtttttgctttgtatacgcccttcatttgagccatta
ggtgcagaagaagctgataaagctacagtaccacagaggctcgggctccagtatgttcgt
ggttgtgaaatcatcgatatccgcgatgaggagggtaatctgatgaatgattttactgga
agagttaaacgggatgagtggaagcccccaaaaggtgaaatgaggactgtgactgttgct
ttagatgctgcacagtatcacatagatgttacagacattgctgaaaaaggtgccgaagac
gtgtatagcacatttaatgtgctaatgaggaggaaaccaaaagagaacaacttcaaggct
attctggaatctatcagagatctcatgaatgaatattgtattgttccggagtggttgcat
aatgtttttctgggatatggcaacccttctgctgcacagtggcctaatatgccaaaccta
ttggaaaccgtggacttcaaagatactttccttgatgcaaatcatctcagtgaaagtttt
ccagattacgaggtgtctttcgtcaatgctgatggtgctgaagttctggatccaaggcct
ccgtttcgaatcactcttccaaagacactaaaagggaatgctaatgctctttctggaaat
aaaatatctgaagtaaatccagcagacaatgttgatgcggtggatgtttccccgaaggag
aaacttattgtcgaagcatataccccacctgacccagggccttaccctcaggatcagccg
aagcagaactcagttaaatttacgcctacacaggttggagcgattatctctggtattcag
cctgggctaactatggtggttggtccaccgggtaccggaaagacagatacagcagtgcaa
atcttaaatgttctatatcacaattgtccttctcaaaggaccttaattatcactcattca
aatcaagctttgaatgatctttttgagaagataatggagagggatgtaccagcgcggtat
ctacttcgtttgggtcagggtgaacaagagcttgccactgatcttgactttagcagacaa
ggccgtgtcaatgccatgcttgttcgacgtttagaactgctcaacgaggttgagagacta
gcaagatctcttcaacttccagaggatgtaggttatacttgtgaaacagctgggtatttc
tggttgcttcatgtatactcacgttgggagctatttcttgctgcttgtgctggaaatgaa
aacaatccatctttcgttcaagatcgcttcccgttcaaggatttcttctcagacacccct
aagcctgtttttagtggggagtcatttgagaaagacatgagggcagctaaaggttgtttc
tctcatctcaagactgtgttccaagagctagaagagtgtagggcctttgaactactaaag
tcaactgctgatagagcaaattacctgatgaccaaacaagcaaagatagtagcaatgacg
tgtactcatgcggcattaaagaggagagattttcttcagttggggttcaagtatgataac
ttattgatggaagaaagtgctcagattttggaaattgagacattcataccaatgttgctt
cagaggcaagaagatggtcatgcacgactcaagcgctgtatattgattggtgatcaccac
cagctgcctcctgtggtgaagaatatggctttccagaaatatagtcacatggatcagagt
ttgtttacgaggtttgttcgtcttggtatcccatatattgagcttaacgctcaaggaaga
gccaggccaagcctagctaagctgtacaactggagatacagagacttgggagacctttcc
attgttaaggaagcacccatatttcacagagcgaatgctggattctcatatgagtatcag
ttgattaatgtgcctgattacgaggggaaaggagagtcgacaccatctccatggttttat
caaaatcaaggagaagctgaatatattgtcagtgtctatatatacatgagattgctagga
tatcctgctaacaagatatccatattgacgacatataatgggcaaaagctcttaatccgt
gatgttatcaaccgtcgatgtgttccctatgctttcatcggcccgccaagcaaggtgact
acagtggacaagttccaaggacaacagaatgattttattctgctgtctctcgtacggaca
aggtttgttggacatttacgtgatgtaagaaggttggtagttgcaatgtcacgtgctcgg
ctcggtttgtatgtgttctgccgacgatctctctttgaacaatgctatgaactgcaacca
acgtttcaacttcttctgaaaagacccgatcggctaggcctcaatctgagtgagaacaca
acagcttatacagatcgcgccgtcgaggaagttggaaatccttatcttgtccatgatgct
caagagatggcacacattgttcacgataggatcaacgagttctacaaggcacaaggcgtg
tatgagcaataccagaattacatgccacaaatagaagacggtaatcaggacatggagagt
gatgcagctgtaggtgcagatggtgaatctgagaagaagatgcagccagacttagacggc
gtagctgatgatgaatcatcgaaggaagtggttggaatggaggtggacaatggatttagc
agtgagaatggaaaggctgacgagaattag

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