Eutrema salsugineum (saltwater cress): EUTSA_v10018284mg
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Entry
EUTSA_v10018284mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
EUTSA_v10018284mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10018284mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EUTSA_v10018284mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
PAS_9
Kelch_5
Kelch_1
Kelch_6
PAS
NANM
PAS_3
PAS_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
18008114
NCBI-ProteinID:
XP_006391190
UniProt:
V4MBC7
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MAREHASETIGKRKKRGRVEEEDEKEDIGDGIGKEVEEEVVGDEELPLELGMFYYPMNPP
SFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGQNCRFLQYRDPRAQRRHPLVDPVVVS
EIRRCLEEGIEFQGELLNFRKDGTPLVNRVRLAPIRDDDGTITHVIGIQVFSETTIDLDR
VSYPVFKQQLDQKSECLVASGSPRFREDHQDVCGILKLSDEVLAHNILFRLTPRDVASIG
SACRRMRQLTKNESVRKMVCQNAWGKEITGTLEIMTKKLRWGRLARELTTLEAVCWRKFT
VGGIVQPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDSEFPEWQRVRVKSSPPG
RWGHTLTCLNGSWLVVFGGCGREGLLNDVFVLDLDAKHPTWKEVAGGTPPLPRSWHSSCT
IEGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPKWREIPTSWAPPCRLGHSLSVFGRTKIL
MFGGLANSGHLKLRSGEAYTIDLEDEKPRWRELECSAFTGEVAPPPRLDHVAVSMPCGRV
IVFGGSIAGLHSPSQLFLIDPAEEKPSWRILNVPGKPPKFAWGHSTCVVGGTRVLVLGGH
TGEEWILNELHELCLASRQDSDM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaacatgcgagcgaaacgatcggaaaacgaaagaaacgcgggagagttgaa
gaagaagacgaaaaggaagacatcggagatggaattggaaaagaagtagaagaagaggta
gtaggagacgaggagcttccattagagcttgggatgttctattacccaatgaatccgcct
tcgtttattgtatccgatgctctcgagccagattttcctttgatctacgtcaatagagtc
ttcgaagtcttcactggttatcgagccgatgaagttcttggtcaaaactgtcgattccta
cagtacagggaccctcgtgctcaaaggcgacacccattggtggatcctgtggttgtgtct
gagataagaagatgtcttgaagaaggtattgagtttcaaggagagcttctcaatttcaga
aaagatggcactccgctggtgaacagagtacggcttgctccaatacgtgacgatgatgga
accattactcatgtaattgggatacaggtcttctccgaaaccactatagacctagaccgt
gtctcatatcccgtcttcaaacaacagcttgatcagaaatctgagtgcttggttgcaagt
ggaagcccgaggttcagggaggatcatcaagatgtctgtgggatattgaagctctctgat
gaagtcttggcgcataacatcttgtttcggttaactccaagagacgttgcttccattggt
tcagcctgcaggaggatgaggcagttgacgaaaaacgagagcgtgaggaagatggtttgt
caaaatgcgtgggggaaagagataaccggaacattggagatcatgactaagaagctacga
tggggtcgtttagccagagagctcactactctcgaagctgtgtgttggcgaaaatttacc
gttggagggattgtacaaccttctcgctgcaatttcagtgcgtgtgctgttgggaaccgg
cttgtgttgtttggtggggaaggtgttaacatgcagccaatggatgatacttttgttctc
aatctcgattcagagtttcccgagtggcaacgtgtgagggtgaagtcatcgcctccagga
cgttggggacacacgctcacgtgcctcaacggatcgtggttggtagtatttggagggtgt
ggaagagaaggattgcttaacgatgtctttgtgcttgatctagacgctaagcatccaaca
tggaaagaagtagctggaggaacacctccattgccaagatcttggcacagctcgtgcacc
attgaaggatctaaactggttgtctcaggtggctgcacagacgctggggtgcttctcagc
gacactttcttgttggatctaacaacagataaaccgaaatggagagagatcccgacctca
tgggctcctccttgtaggcttggacattctctatcggtgtttggccggactaaaatctta
atgtttggtgggcttgcaaatagcggtcatctaaagctaaggtcaggggaggcatatact
atagacttggaagatgaaaaaccgagatggagagagctcgagtgtagcgcattcacaggt
gaggttgcaccgcctccaagattggatcacgtggctgtgagcatgccgtgtggtagagtc
atcgtctttggaggctctattgcagggcttcactctccttcgcagttgtttttaatagat
cctgcagaagagaaaccgtcgtggaggatcctgaatgtccccggaaaaccgcctaagttt
gcttggggacatagcacatgcgttgttggagggactagagttttggtcctgggtggtcac
acgggtgaggaatggatactcaatgagttacatgaactctgcttggctagccgacaggac
tcagatatgtaa
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