KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10023898mg
Entry
EUTSA_v10023898mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03022  Basal transcription factors
eus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EUTSA_v10023898mg
  09124 Replication and repair
   03420 Nucleotide excision repair
    EUTSA_v10023898mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10023898mg
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10023898mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     EUTSA_v10023898mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     EUTSA_v10023898mg
SSDB
Motif
Pfam: Tfb5 DUF2441
Other DBs
NCBI-GeneID: 18009497
NCBI-ProteinID: XP_006391809
UniProt: V4JUR2
LinkDB
Position
Unknown
AA seq 82 aa
MVNSIKGIFFFYLRFLFLSSCSDVPMAQFIAHLNNSSPSSQRFIIQILKLDTICMFVKPQ
AEQIIRSEVSKFRDQLSFAKPA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggttaattccatcaaaggaatcttctttttttatttacgtttcttgtttctttcttcg
tgcagtgatgttcccatggcacagttcattgcacatttgaacaattcgtcgccttcttca
cagagattcataatccaaatactgaaactagacactatttgtatgtttgtgaagccacaa
gctgagcagattatccgcagcgaggtctccaagttcagagaccaactttctttcgcaaag
cccgcttga

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