Enterobacter hormaechei subsp. xiangfangensis: BFV63_00970
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Entry
BFV63_00970 CDS
T04821
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV63_00970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exf03019
]
BFV63_00970
03400 DNA repair and recombination proteins [BR:
exf03400
]
BFV63_00970
Enzymes [BR:
exf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFV63_00970
Messenger RNA biogenesis [BR:
exf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFV63_00970
DNA repair and recombination proteins [BR:
exf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFV63_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOP89542
UniProt:
A0A837FIW3
LinkDB
All DBs
Position
197546..199375
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLHETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQEVMAGCRTGQVRLLY
IAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPELPFMAL
TATADDTTRQDIVRLLGLNDPYIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPKQYDGLMDARKAL
STIGRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGKDQSHEHWVSIIRQLIHLG
FATQNIAQHSALQLTEAARPVLRGEVELKLAVPRVVALKPRVMQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSASEMLSVNGVGTRKLERFGKEFMALIR
SHADGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttgcatgaaacc
tttggctaccagcagttccgtcctggccaggaaaccatcattgaaaccgtgctggaaggc
cgcgattgcctggtggtcatgccgaccggcggcggtaaatcgctctgctatcaggtgccc
gcgctggtgcttaatggcctgacggttgtggtatcaccccttatttccctgatgaaagac
caggtcgaccagctgctcgccaacggcgtggcggcggcctgtcttaactcaacgcaaact
cgcgagcagcagcaagaggtgatggccgggtgccgcaccggacaggttcgcctgctgtat
atcgcgccagagcgcctgatgctggacaacttcctcgaccacctggcgcactggaacccg
gtgctgctggcggtggatgaagcgcactgtatctcccagtgggggcacgatttccgcccg
gaatacgccgccctcggccagcttcgtcagcgcttccccgagctgccgtttatggcgctt
accgccacggcggacgacaccacgcgtcaggacatcgttcgcctgctgggactgaacgac
ccgtatattcaggtcagcagcttcgaccgcccgaacatccgctatatgctgatggaaaag
ttcaagccgctggatcagctcctgcgctacgtgcaggagcagcgcggcaagtccggcatc
atctactgcaacagccgcgcaaaggtggaagacaccgctgcgcgtctgcaaaatcgcggc
tttagcgcggcggcataccatgccgggttagagaaccacatccgcgccgatgtgcaggaa
aaattccagcgcgacgacctgcaaatcgtggtcgcaacggtggcgttcgggatggggatc
aacaagcccaacgtgcgctttgtggtgcatttcgacattccgcgcaatatcgaatcctac
tatcaggaaaccggccgcgccgggcgtgatggtctgcctgcggaagcgatgctgttttac
gacccggcggatatggcgtggctgcgccgctgtctggaagagaaaccgcaggggcagttg
caggatatcgaacgccacaagcttaacgcgatgggggccttcgccgaagcgcaaacctgc
cgccgtctggtgttactcaactactttggtgaagggcgtcaggcgccgtgcggcaactgc
gatatctgcctcgacccgccgaagcagtacgatggcctgatggacgcgcgcaaagcgctc
tcgactatcggacgcgtgaaccagcgctttgggatgggctacgtcgttgaagtgctgcgc
ggggctaacaaccagcgtatccgcgatatgggtcacgacaagctaccggtttacggcatc
gggaaagaccagagccatgagcactgggtgagtattatccgccagttgatccacctcggc
tttgccacgcaaaatattgcccagcattctgcgcttcagctgaccgaagcggcgcgacct
gtcctgcgtggcgaggttgaactgaagctcgccgttccgcgcgtcgtcgccctgaagccg
cgcgtgatgcaaaaatcctacggcggtaactacgaccgcaagctgttcgccaagctgcgt
aagctgcgtaaagctattgccgatgaagagaacatcccgccatacgtggtgttcaacgac
gcgacgctgatcgagatggccgagcaaatgccgctcagcgccagcgagatgctcagcgtc
aacggcgtcggcacgcgcaagctggagcgcttcggtaaagagtttatggcgctcatccgt
tcccacgctgatggtgatgatgaggagtag
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