Enterobacter hormaechei subsp. xiangfangensis: BFV63_01250
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Entry
BFV63_01250 CDS
T04821
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFV63_01250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
exf03021
]
BFV63_01250
03400 DNA repair and recombination proteins [BR:
exf03400
]
BFV63_01250
Enzymes [BR:
exf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFV63_01250
Transcription machinery [BR:
exf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFV63_01250
DNA repair and recombination proteins [BR:
exf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFV63_01250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AOP89592
LinkDB
All DBs
Position
249556..253584
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEADGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQAGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggcctggaagcagccttccgttccgtgttcccgattcag
agctacagcggtaattccgagctgcagtacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagatattaaagaacaa
gaagtctacatgggtgaaattccactcatgacggacaacggtactttcgttatcaacggt
actgagcgtgttatcgtttcccagctgcaccgtagcccgggcgtcttcttcgacagcgat
aaaggtaaaacgcactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgaattcgatccaaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaagcttcctgcaaccatcattctgcgtgcactgaactataccactgagcagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagttgcagatggag
ttggtgccggaacgtctgcgtggtgagaccgcgtcgttcgacatcgaagccgacggcaaa
gtgtatgtggaaaaaggtcgccgtatcaccgcgcgccacatccgccagctggaaaaagat
gatatcaaacacatcgaagttccggttgaatacattgcaggaaaagtagccgcgaaagat
tacgttgatgaatcaactggcgagctgatctgcccggcgaacatggagctgagcctggat
ctgctggctaagctgagccaggctggccacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggtccgtacatctctgagactgtacgcgtcgacccaaccaacgatcgtctg
agcgcgctggtcgaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcattgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggacgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgcg
gcagtgaaagagttcttcggttccagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagatcacgcacaagcgtcgtatctccgcactcggcccaggcggtctgacccgt
gaacgcgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
acgaacgaatacggtttcctcgagaccccgtatcgtaaagtgaccgacggtgttgttact
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccactcagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgtgctgacaagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttacagcagttgctaagcgt
ggcggtaccgttcagtacgttgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggtatcgacatctacaacctgaccaaatacacccgctctaac
cagaacacctgtatcaaccagatgccatgtgtgtctctgggtgagccagttgagcgcggc
gacgtgctggcagatggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctcagag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcatgtgtgtcc
cgtgacaccaagctggggccagaagagatcactgccgacatccctaacgtgggtgaagct
gcgctctccaaactggatgaatccggtattgtttacatcggtgcggaagtcaccggcggt
gatattctggtaggtaaggtgacgccgaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgctatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcactcgtgatggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcaaatcctcgaagcaggtctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacagaatcagctggaacaactggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgtaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggctgttaaacgtcagatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaaccca
ctgggcgtaccgtctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcgaaaggtatcggcgataagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgagttcatccagcgtgcctatgatctgggtactgacgttcgtcagaaagtcgac
ctgaacaccttcagcgatgaagaagtgctgcgtctggcagagaacctgcgcaaaggtatg
ccaattgcaacgccggtattcgacggtgcaaaagaagctgaaattaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcagcatacaccttgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtactaagatgtataaaaacatcgtagacggcaaccatcagatggagccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
