Enterobacter hormaechei subsp. xiangfangensis: BFV63_19350
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Entry
BFV63_19350 CDS
T04821
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
exf
Enterobacter hormaechei subsp. xiangfangensis
Pathway
exf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
exf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFV63_19350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
exf03019
]
BFV63_19350
03009 Ribosome biogenesis [BR:
exf03009
]
BFV63_19350
Messenger RNA biogenesis [BR:
exf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFV63_19350
Ribosome biogenesis [BR:
exf03009
]
Prokaryotic type
rRNA helicases
BFV63_19350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOP92948
LinkDB
All DBs
Position
complement(4056575..4058470)
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AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEAELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRENRGPRREEGASRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaaccgcagcattc
tcgctgccgctgctgaacaacattgatccggacctgcgcgcgccgcagatcctcgtcctg
gctccaacccgtgaactggctgttcaggttgctgaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacaaattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggacctctctaaactgagcggcctggtactggacgaagccgatgaa
atgctgcgtatgggcttcatcgaagacgtagaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaactatgccagaagcgatccgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgcattcagtccagcgtgaccactcgcccggacatc
agccagagctactggtctgtatacggcatgcgcaaaaacgaagcgctggtccgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtacgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggcctggacgttgagcgtatcagcctggttgtaaactac
gatatcccaatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgcaggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatt
gaacgcacgatgaagctgaccattccagaagctgagctgccaaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcccagatccagcctgtcgctgaaggcgaagagctggac
atggaaaccctggccgcagcactgctgaaaatggcgcagggcgaacgtagcctgatcgtg
ccacctgatgcgccgatgcgtcctaagcgtgagttccgtgaccgtgacgatcgtttcgaa
cgtcgtggcgaccgtaacgaccgtggtccacgcggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgcgagcgtcgtgacgctggcgaaatggaactgtatcgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcggttcccactccaccatcgagctg
ccaaaaggcatgccgggcgaagtactgcaacactttactcgcacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgaacgt
cgtggcggtggtcgcggtttcggtggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggccgtcgtttctccggcgagcgccgcgaaaaccgtggtccacgccgtgaa
gaaggtgccagccgtcgtcgtttcggtgacgcgtaa
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