Exiguobacterium sp. U13-1: ESP131_02825
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Entry
ESP131_02825 CDS
T04561
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
exu
Exiguobacterium sp. U13-1
Pathway
exu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
exu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ESP131_02825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
exu03021
]
ESP131_02825
03400 DNA repair and recombination proteins [BR:
exu03400
]
ESP131_02825
Enzymes [BR:
exu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ESP131_02825
Transcription machinery [BR:
exu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ESP131_02825
DNA repair and recombination proteins [BR:
exu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ESP131_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AOT01812
LinkDB
All DBs
Position
539195..542752
Genome browser
AA seq
1185 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTNSYEWFLREGLREMFHDISPISDFTG
NLVLEFIDYSLGEPKYSIDESKERDVTYSAPLRVKVRLQNKETGELKEQEVFMGDFPLMT
ESGTFIINGAERVIVSQLVRSPSVYYNNKLDKNGKRGFSATVIPNRGAWLELETDAKDIV
YVRIDRTRKIPVTVLLRALGFGTDQEIIDLLGDDEYLRNSLEKDNTESTEKALIEIYERL
RPGEPPTVENAKALLVSRFFDPKRYDLANVGRYKINKKLHLKNRLFGQKLAETLVDPETG
EVIAEAGTVLDRRMLDKVLPFLEGSVGYIEATPTGGVTQGEAFNLQSIKVFAPDDAEGER
IINIIGNGNIDRDIKHITPADMIASINYFFNLLHEVGTTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVKERMSIQDQNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAE
LTHKRRLSALGPGGLTRERAGFEVRDVHYSHYSRMCPIETPEGPNIGLINSLSSYAKVNE
YGFIEAPYRRVDPETGVVTDEIHYMTADEEDLYVVAQANMLLTEEKTFQDSHVLSRFRGQ
NLSVEPARVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLLNPESPIVG
TGMEYVSAKDSGAAVVAKHAGIAERVTAREILVRRTTEVDGNIVEGELDRYKIQKFIRSN
QGTCYNQKPIIKAGDPVDKGEILADGPSMDGGELALGRNVLVGFMTWDGYNYEDAVIMSE
RLVKDDVYTSIHIEEYECESRDTKLGPEEITRDIPNVGDDALKNLDDRGIIRVGAEVKDG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGDGIILDVKIFDRDNGD
ELSPGVNQLIRAYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYMPDGTPIDIMLNP
LGVPSRMNIGQLLELHLGMAARQLGIKVASPVFDGAREEDVWATIEEAGMDRDAKTVLYD
GRSGEAFDNRISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTIKSDDTIGRVKAYEAIVKGENVPQPGVPESFRVLIKELQSLG
MDVKMMSADDEEIEMRDEDEDNIPNATPALEEVQAPVAPVVTEEE
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
ttgactggtcaacttgttcagtacggtcgtcaccgtcagagaagaagctatgcacgtatc
agcgaagtattggaacttccaaacttaatcgagattcaaacgaattcgtatgagtggttc
ctgcgggaaggtcttcgtgagatgtttcatgacatttcgccgatttccgatttcacaggg
aatctcgtattagaattcatcgactactcgctcggagagccgaagtattcgatcgatgaa
tcgaaagagcgcgacgtgacctattcggcaccactacgcgttaaagtccgtcttcaaaat
aaagagacgggtgaattgaaagaacaagaagtcttcatgggtgacttcccgcttatgacg
gagtcgggaacattcatcatcaatggagcggagcgcgtaatcgtttcgcagcttgttcgt
tcgccaagtgtttattacaacaataagttagataagaacggtaagcgtggattctccgcg
acagtcatcccaaaccgtggtgcatggctcgagctcgagacagacgcgaaagacatcgtt
tatgttcgcattgatcgcacgcgtaagattccagtaacggttcttttacgtgctcttggt
ttcggtacggatcaggaaatcatcgatcttctcggtgatgatgagtacctccggaattca
cttgaaaaagataatacggaatcaacggaaaaagccctcatcgagatttatgagcgtcta
cgtccgggagagccgccgacagtcgaaaacgcaaaagcgttactcgtgtcgcgcttcttt
gacccgaaacgttatgatttggcaaacgttggtcgttataaaatcaataaaaagcttcat
cttaagaaccgtctcttcggtcaaaaacttgcggaaacgcttgttgatcctgagacaggt
gaagtcatcgcggaagcaggaacggtccttgatcgtcgtatgctcgataaagtccttcca
ttcctcgaaggatccgttggttacatcgaagcgacgcctacaggcggcgtgacgcaaggt
gaggctttcaacttacagtcaatcaaggtgttcgcaccggacgatgctgaaggtgaacgc
atcatcaatatcatcggtaacggtaacatcgatcgtgacatcaagcacatcacgcctgct
gacatgattgcttctatcaactacttcttcaacttgttgcatgaagtcggtacgacagac
gatatcgaccacctcggtaaccgtcgtctccgttcagttggtgagctgctccagaaccaa
ttccggatcggtctctcacggatggaacgtgtcgttaaggaacggatgtcgattcaggat
cagaatgcgatcacgccacaggcattgatcaacattcgtccagttatcgcatcgattaaa
gagttcttcggtagctcgcagttgtctcagttcatggaccaaacgaacccgcttgcggaa
ttgacgcacaaacgtcgtctttcagcactcggacctggtggtttgacacgtgagcgcgct
ggtttcgaagttcgtgacgtacactactcgcactattcccgtatgtgtccgatcgaaacg
ccagagggaccaaacattggtttgatcaactcgttgtcttcgtacgcgaaggtcaatgag
tacggcttcatcgaagcgccatatcgtcgtgtcgatccggaaacgggcgttgtcacagat
gaaatccactacatgactgctgacgaagaggatctctacgtcgtcgctcaggcaaacatg
ttgttgacggaagagaagacgttccaagattcacacgttctttcacgtttccgtggacaa
aacttgtctgtcgaaccagcacgtgtcgattacatggacgtttcaccgaagcaggttgta
tctgccgcaacggcttgtatcccgttccttgagaacgatgactcgaaccgtgccctcatg
ggagcgaacatgcaacgtcaggccgtcccacttctgaacccggaatctccgattgttggt
acaggtatggagtacgtgtctgcgaaagactcaggagccgctgttgttgcgaagcacgca
gggatcgctgagcgtgtcacggcgcgtgaaatccttgtccgtcgtacgacggaagtcgat
ggcaacatcgttgaaggggaactcgaccgttacaagatccaaaaattcatccgttccaac
caaggaacgtgttataaccaaaaaccaatcatcaaagcaggcgacccagtcgataaaggc
gagatccttgcagatggtccatcgatggacggtggggaacttgcgcttggtcgtaacgta
ctcgtcggtttcatgacatgggatggttacaactatgaggatgctgtcatcatgagtgag
cgtcttgtcaaagacgacgtctacacatcgatccacattgaagaatacgaatgtgagtcg
cgtgatacgaaactcggaccggaagaaatcacacgtgatattccgaacgtcggtgatgat
gccttgaaaaacctcgacgatcgcggaatcatccgcgtcggtgcggaagtcaaggacggc
gatatcctcgtcggtaaagttacgccgaagggtgtaacggaattgacagcggaagagcgt
cttcttcatgcgatcttcggtgaaaaagcacgtgaagtccgtgatacatctctccgtgta
ccacacggtggtgatggaatcatcctcgacgtcaaaatcttcgaccgcgataacggggac
gagctctcacctggtgtcaaccagttgatccgtgcttatatcgttcagaagcgtaagatt
cacgagggtgacaaaatggcgggtcgtcacggtaacaaaggtgttatctcgcgtatcctt
ccagaagaagacatgccgtacatgccagacggtacgccaattgacatcatgttgaaccca
ctaggggttccatcacggatgaacatcgggcagttgctcgagcttcacctcgggatggca
gcacgtcaactcggcatcaaagtcgcatcaccagtatttgatggtgcgcgtgaggaagat
gtttgggcaacgattgaagaagcaggtatggatcgcgacgcgaagactgtcctttatgat
ggtcgttcgggtgaagcgttcgataaccgcatctctgtcggtgtcatgtatatgattaaa
cttgctcacatggtcgatgataaacttcacgcacgttcgacaggaccatactcactcgtt
acacaacaaccgctcggtggtaaagcacagttcggtggtcagcgtttcggtgagatggaa
gtatgggcacttgaagcatacggcgcagcctacacgctccaagagatccttacaatcaag
tcggatgacacgatcggtcgtgttaaagcgtacgaagcaatcgtcaaaggtgagaatgta
ccacaaccgggcgtaccggaatcgttccgagtcctcattaaagagcttcaatccctcggt
atggacgtcaagatgatgtctgctgatgatgaagagatcgaaatgcgcgacgaagacgag
gacaatatcccgaacgcgactccagcactcgaagaagttcaagcgcctgtcgcaccagtt
gttactgaagaggaataa
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integrated database retrieval system
