Ficedula albicollis (collared flycatcher): 101805718
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Entry
101805718 CDS
T02815
Symbol
NOD1
Name
(RefSeq) nucleotide binding oligomerization domain containing 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04621
NOD-like receptor signaling pathway
fab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101805718 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101805718 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
fab04054
]
101805718 (NOD1)
Pattern recognition receptors [BR:
fab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101805718 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_16
FumaraseC_C
AAA_22
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
101805718
NCBI-ProteinID:
XP_005040906
UniProt:
A0A803VSG6
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Position
2:43918965..43951585
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AA seq
950 aa
AA seq
DB search
MEGHLCANVDISVRKPPGASPQSFIALLKVHRELLVGRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFVYVLQKVTDAYYELQPWLDEIGYEPSENI
CTKPVVNTDPVSRYCQKLRHELGRDSKFVMLYAQKEEMLLEEIYSNNIMELVSFTNESLG
QVGQLEALFDDAVGLINEDGETVYVYGDAGIGKSILLQKIQSLWARKELDIGAKFFFCFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEMCSPNEPIHPLALLISLLRGKLLKGSKKILTARTGTEIQKNIIRKKVLLRGFSRN
NLKEYTALFFRDERQRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSTFDSHELPD
SSVTLTDVFLLMIEVHLNRSVKTSLLKSNIRSQTEMFKSRKESLLALGKMAYKGMENSSF
IFEQEEVSSANISEEDLQLGFLRTVKGYSGCHSQATYEFLHVTLQSFFTALFLVMEEKVG
TKELLEFFNECSSMETAQPTCLRIPWKKQLSGEDPFQNKEHFNFTNMFLCGLLSGSRQKL
FRHFVSPAVIKRKRKTLFTYLGKSMKSHLKGYTRSRLKSYNQVQMQPNFVWMLRCLYETQ
SEKVGRMAAHRMHANYIKLAYCNAHSADCSAISFVVHHFQKRLALDLDNNNINDYGIRQL
QPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLIEEC
SSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRLT
NVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLWL
IQNQITAKGVKCLSEALKENTTIQEICLNGNLMSQEEAKAFENEERIICF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccatctttgtgctaatgtggacatttctgtgagaaaacctccaggagcaagc
cctcagtccttcattgctttgctgaaggttcaccgagagcttctggtcggtaggatccga
aacacgcagtgtttgattgataacttgattaagaatgactacttctccactgaagatgca
gagattgttgtccagtttcctactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaagtttcggaatattttgtctatgtcctgcagaaagtcactgat
gcttactatgaacttcagccttggctggatgaaataggttatgagccttcagagaatatt
tgtactaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagtttgttatgttgtatgctcagaaggaggagatgctgctt
gaagaaatctactccaacaatattatggagctggtcagttttaccaatgagagtcttggc
caggtgggtcaattagaagccctttttgatgatgcagtggggctaattaatgaagatgga
gagactgtttatgtctatggtgatgcaggaattggaaaatccatcttgctgcaaaagata
caaagcctttgggctagaaaagaattggacataggggccaagtttttcttctgttttcgg
tgtaggatgtttagctgcttcaaggaagatgaagcaatatgtttgaaagacctgctcttc
aaatataattgttacccagaccaggaccccacagaagtgtttcatcacatcttgcagttc
ccccatacagttcttttcacttttgatggctttgatgagatctattccaactttgatctc
agcagcgtacctgagatgtgctcacccaatgaacccatccaccccctggcactgctcata
agccttctcagagggaagcttcttaagggatccaagaaaattcttactgccaggacagga
actgagatccaaaaaaacatcattaggaagaaagtgttgctccgtggtttctccaggaac
aacctgaaggaatacacagctttgtttttcagagatgagcggcaacgagcactggtatca
aaccagttggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcactttcactccacgtttgacagccatgagcttccagac
agttctgttacattaacagatgtgtttttgctcatgattgaagtccacctgaaccgatct
gtgaaaacaagtttgctgaagagcaatatcagaagccaaacagagatgttcaaatccaga
aaggaaagtcttctagctttgggtaaaatggcctacaaagggatggagaactcttccttt
atctttgagcaggaggaagtctcatcagcaaatatatctgaagaagatttgcaattgggc
tttctcaggacagttaaaggttacagtggctgtcacagtcaggccacttacgagttcttg
catgtaacccttcagtcttttttcacagctttgttcttggttatggaggagaaggtgggt
accaaggagttacttgagtttttcaatgaatgttcttccatggagactgcccagcctact
tgccttcgtattccctggaagaaacaactatcaggggaggatcctttccaaaataaagaa
cactttaattttaccaacatgtttctttgtggcctactttctggatccaggcagaagctc
ttcagacatttcgtttcgcctgcggtcattaagaggaagagaaaaactctcttcacatac
cttgggaagagcatgaaatcccacctgaaaggctacactcggtccaggcttaaaagctac
aatcaggtgcagatgcagcccaactttgtgtggatgctgagatgcctgtacgagacgcag
agtgagaaggtggggaggatggcagcccaccgcatgcacgccaactacatcaagctggcc
tactgcaatgcccactctgccgactgcagcgccatttccttcgtggtgcaccacttccag
aagcgcctggctctggatctggacaacaacaacatcaatgactatggaataaggcagctg
caaccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagatcat
ggtgtaaggatcttgtatgaagaactctccaagtaccaaattgtgtctttcctgggctta
tacaacaaccaaatcactgatgttggagccaaatatgttgcaaaactaattgaagagtgt
tcaagcctggaatatgttaaaataggagcaaacaaaataacgagtgaaggagggaagtgc
cttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtgggggaatcaa
gttggagatgaaggagcaaaggcatttgcagaggccctgaggaaccaccccaggttaaca
aacgtgagtcttgcattcaatggcatcacgacagagggaggcaaaagtattgctgaagcc
atgcaacacaacaactccgtgaggatattctggttgactaaaaacgagctggatgatgag
gcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatggctt
atccagaatcaaattacagccaaaggggtgaagtgcctcagcgaagctctcaaggagaac
acgactattcaagaaatctgcttgaatgggaacctgatgagccaagaagaggccaaagct
tttgaaaatgaagagcggatcatttgtttttga
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