Ficedula albicollis (collared flycatcher): 101805823
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Entry
101805823 CDS
T02815
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat domain 37
KO
K12600
superkiller protein 3
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101805823 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101805823 (TTC37)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101805823 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_11
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_6
ANAPC3
ARM_TT21_C
TPR_15
BTAD
Retrotran_gag_2
Fis1_TPR_C
TolB_N
TPR_30
TPR_5
TPR_20
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
101805823
NCBI-ProteinID:
XP_005061305
UniProt:
A0A803VP28
LinkDB
All DBs
Position
Z:complement(56952960..57000591)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQIDVKGDLADVYQKLLELYESGDKQKWCDVCN
KLVELYHQEKKYLEVAETLQKLIKMKQEEGAEKAELHQLWKKMIHLLKDSTRNQDNKTGQ
LLLSAFEHALLSADTVPGDDHQNLYKDFIQCLSKFPHEAARLEKACHDMVALYPTVSYPL
EVLCLHFVQSGTLSEEALDCFSRLLEMDANSGPGIIGFGIKCLKENKYKEAVKNLTEGLQ
KTNQCPAAWHYLAEAQMKIHEHRNAVLSCNKALEALGTPEGPNLRWKNLALQLKAETLIK
IADADAAEEAIKALELIVDGSSDPVVLALRGQAYLNKGLMDQASKISQELLLSHPDLAEA
HALEGFIHYSQKNYEQAEKSFLNAIERKAGTAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSAFCYLGNYYRDIAGDKSRARGCYKKAFELDEMDEESGTAAVSLSVELG
DMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGQPSQAVADLQAALRADPKDSNCWE
SLGEAYLNRGSYSTALKSFRKASELNPGLVYSIYRAAALEQILGKYENAIATYQQILKKT
ENYVPALKGLGECYLMLARSALDNYLDRKAVDYIEQALAYFTRAVKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVPGSLLSKSATKQILKKNELLILGGRCYGRALKLMSLPSIWCDL
GINYYRQAEHLTAVGANMNEISELLEKSLQCLKKAVRLDSKNHLYWNALGVVACCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAFKIAQSLDPSYLLCWIGQA
LIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDKTNRNTELYLYNIVQMNAI
PAAQVVLSKYTERNPDDASAFTMFGFLNEYLHLKQQAAYAYERAASLLKNSEDTEKYNTA
MQNYGRSLCALGLCDEAIEVYTSIPLTEFDGIVGLALAYFKKGLLEESIKAYEKALSVAE
SEKDKAHILTALAIIEYKLNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDGIYERCLIASAVYALQGRNTAIQREVSKAIHSYPGNPALWSLLSRLV
PLYASKKPKGGAVAGSVAHTLDVNRGKEVLLNIAVNQLVAGYHMLEDKKNNPLKNIQKAI
HVCPDNPAAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVSTVSAKTGESNLPHNYVRT
LEDWCLCQAITSLEETGKLSEAEALCKKGLKSCPEHPALFLLLRQVQCKQLLQSHKELPD
NILEELHKTVMSSSSSAAAWQWLAKIYQSQRMMTGAEMCYRKSLQLASQQGSWNGKLSSL
LRLAMLALEICMANISNEHWPSLVQEATTEALKLSPCPLAALLQALLQYNRKMGARETRR
MLERVVYQPENPKTVVSVARWYLLQHLYAKDDCELIDVLIENAKANGDVRALELNEKLSA
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagagatgcaataagaaataaa
gagtataaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcttgggtgtttattggcctggcagccgccgagttagagcagcctgatcaggccaaa
ggagcatacaagaaggccattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttgtatgagaaacccaaccaaatagatgtcaaaggagacttagcagatgtttac
caaaaactcttggaactctatgaaagtggtgacaagcagaaatggtgtgatgtatgtaac
aagcttgtggaactataccatcaagaaaagaaatatttagaggtggctgaaactttgcag
aagctaataaagatgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccatttactgaaagacagtacaaggaaccaggataataagactgggcag
ttgcttttgtctgcatttgaacacgcgctgctctctgctgacactgttcctggtgatgac
caccaaaatctttataaagacttcatacagtgcttgtcaaagtttcctcatgaagcagct
aggttggaaaaagcttgtcatgatatggtggctttgtaccctactgtgagttaccctttg
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctggactgt
ttctctaggcttttggagatggatgcaaacagtggtccaggcatcattggttttggtata
aaatgcctcaaagaaaataaatacaaggaggcagttaagaatctgactgaaggtttgcag
aagactaaccagtgtccagcagcatggcattatctagcagaggcacagatgaaaatccat
gagcacaggaatgctgtcctgtcctgtaataaagctcttgaggctcttggaactcctgag
ggtcctaatcttcggtggaagaaccttgcccttcagttgaaagcagagactttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagctgattgtagatgga
agcagtgatccagtggttttagctctcaggggtcaggcttatctaaacaaaggtttaatg
gaccaagcttcaaagatttcgcaggagcttctgttgtcccaccctgatctggctgaggcc
catgctctagagggtttcatccattattcccaaaagaactatgagcaggcagaaaaaagt
tttctaaatgctattgaaaggaaggctggaactgcagaatatcatcagtacctggggctc
acatactggttcatgagtgatgagacaaaaaaagacaagggaaaagcactcactcagttc
ttgaaggctgcaaaattggatagctacttgggaagtgccttttgttatctaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgagatggacgaagaatctggaacagcagctgtcagcttaagtgtggaacttgga
gacatggacactgctctgtcaatcctgaatgaagtaactgaaaaagcaagacctggtaca
gcaaaatgggcctggcttcatcgtggactttactacttgagaactggtcagccgtcacaa
gcagtggctgatttgcaggcagctctcagggccgatccaaaggattccaactgctgggag
tctctaggagaggcttacttgaacagaggtagctactcaacagctctgaaatccttcagg
aaagcaagtgagctgaacccagggctcgtgtacagcatttacagagctgcagcacttgag
cagattctaggcaaatacgaaaatgctatagctacctatcaacaaattttaaagaagaca
gaaaactatgtgcctgcactaaaaggacttggtgagtgttatcttatgctggcaagatca
gcccttgataactatttggataggaaggctgtggattacatagagcaggcccttgcatat
tttacaagggcagtaaagcaccgtcctgatgtatcttgcctctggaaactcctaggagat
acctgtactagtgtgcatgttatttcaccaaccaaagtaaatgttcaagtaccaggatcc
cttctgagtaaaagtgcaaccaaacaaatactgaagaaaaatgagcttctcatactggga
ggaaggtgttatggcagagctttaaaactgatgtctttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcggagcacctcacagcagtgggcgccaacatgaatgag
atcagtgaactgctagagaaatctttgcagtgtctcaaaaaagctgtgagacttgacagc
aaaaatcatctttattggaatgcacttggtgtagttgcttgttgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaagatagcccagtctctggacccttcttacctgttgtgttggattggacaggct
cttattgcagagaccgtgggcagctatgataccatggatctcttcaggcacacaactgaa
ctcagtatgcatactgagggagcaaaaggctatgcccactgggtatgttcaacactccag
gataaaaccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctata
ccagcagcccaagtggtcttgagcaaatatacagaaagaaatccagatgatgcttctgct
ttcacaatgtttgggtttttgaatgaatatctgcatctgaaacagcaggcagcctatgcc
tatgagagggcagcttcactgctgaaaaactcagaggatactgagaaatacaatacagca
atgcaaaactatggcaggtcactgtgtgctcttgggctgtgtgatgaggccattgaagtt
tacacatcaatacccctaactgagtttgatggcattgtgggactagcattagcttacttc
aagaaaggactcttagaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaaaaagataaagcacatatcctgactgccttggcaataatagaatataaactgaac
aaagtggatgctgcaaagactctgctgtttaaatgctcactaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggattggtaaagcaggatgcaacacttgcaacagca
gccctaaaagaattactgaagcatgaaaaaggggatgatgggatttatgagaggtgtctt
attgcatctgctgtttatgcattgcaaggtagaaatacggcaatccagagggaagtctcc
aaagcaatacacagttaccctggtaaccctgccctttggtctcttctgtctcgactagtt
ccactttatgcatcaaaaaagccaaaaggaggagctgtggcaggaagtgttgcacataca
cttgatgtaaaccgtggaaaggaagtcctgctgaatattgcagttaatcagttggtagca
ggatatcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggccatc
catgtctgcccagataatcctgctgcttgggcagtgctaatggcagcctgtcatgctgaa
aacactgttgtctgtctaaacaacactgaaccgaaacgaacaggtctagagatgacactt
gtgtctacagtttcagccaaaactggagaaagtaaccttccacataattatgtccgtact
cttgaagactggtgtctgtgtcaagctattaccagtctagaggagactggtaaactatca
gaagctgaagctctttgtaaaaagggtttaaaaagctgtcctgagcacccagctctgttt
ttgcttttgagacaagttcagtgtaaacagctgttgcaatctcacaaagaacttccagac
aacatcctggaggagcttcacaagacagtcatgtccagttcatcctcagctgcagcctgg
caatggctggcgaaaatatatcagtctcagagaatgatgactggagcagagatgtgttac
agaaagagtctgcagttggcatcacagcagggcagctggaacgggaagttatccagtctg
ctcaggctagctatgcttgcactggagatctgcatggctaatatctcaaatgaacactgg
ccatccttggttcaggaggcaacaactgaagctttgaaactttctccttgtcctctggca
gctctgcttcaagccctgctacagtataatcgcaaaatgggagcaagggagactcggcga
atgttggagagagtcgtttatcaaccagagaatccaaaaactgtagtgtcggtggcacgc
tggtacctcctgcaacatctgtatgccaaagatgattgtgaattaattgatgtgcttata
gaaaatgccaaagctaatggagatgttagagctctggagctaaatgagaaattgtcagca
agtgcctag
DBGET
integrated database retrieval system
