Ficedula albicollis (collared flycatcher): 101810482
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Entry
101810482 CDS
T02815
Symbol
DIS3L
Name
(RefSeq) DIS3 like exosome 3'-5' exoribonuclease
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101810482 (DIS3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101810482 (DIS3L)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101810482 (DIS3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
101810482
NCBI-ProteinID:
XP_005051754
UniProt:
U3K610
LinkDB
All DBs
Position
10:complement(4018589..4033263)
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AA seq
1057 aa
AA seq
DB search
MLRTEKVLQLRGQQGRAVRVVREHYLRPDVPCCSALCRSAQCRAACARDGKLLSDDVTHY
VVPDCKVVQEYLEILEFPELKGIIFMQTACQAVQHQKGRRQYNKLRNLLKDPRHDCTVFA
NEFHQHCYLPREKGESMEKWQTRNIYNAAAWYHNHCLGQMPVVMVTEDEDAIRQYGNETE
GVFVISFKNYLDNFWPDLKAAHELFDSIVQARRERESESQENHGKEYPEHLPVEILEAGI
KSGRYLQGTLNVNKHRAQLEAFVRLQGFGSKNTELQSDILIYGAKARNRAIHGDVVVVEL
LPVHEWKGRTVALCENETEDKAPADTTGDPMPTGKVVGIIQKNWRDYVVTFPSKEESQSQ
GRNAQKVLVTPWDYRIPKIRISTQQAEALQEYRVVVRIDSWESTSLYPNGHFVRVLGRIG
DLEGEIAAILVENSICAAPFSEIQMSEMPVSSPKNPWKVSPEEAKKRLDLRDTHLIFSID
PKGCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDM
LPAVLSADLCSLLSGVDRYAVSVLWELEKESFETLRVQYSRTLIRSAYKLEYETAQALLD
GDTSVVGDIVELQSLDEGTRQKKLAELVWAISKLTDIARHVRAKRDRCGALELEGIEIRV
QLDDRRNIHDLIPKQPLEVHETVAECMILANHWVAKRISEDFPHQALLRQHPPPRQEFFT
ELRECASAKGFSIDTRSNKALAESLDRANDPSDPIVNKLLRSMATHAMSNALYFSTGSCP
EEQFHHYGLALEKYTHFTSPIRRYADIIVHRLLMAASLRGTTGDVKDNIISNKDLEELCR
HINNRNRAAQRAQKQSTELFQCMYFRDRSAESDERCVADGVIYSIRTNGVLVFVPRYGIK
GAAYMKNKEGLVISCQGAGSCQWKPGSLHRSQHKITSTTTTGDSVTLSLFDHITVRILVQ
SSRCHAESIKLEIIRNAPHHTADTEAAHRSSHVVRSDLVKEVSQYAEEAQRAQERARVEV
MDEESREFCQTKGPSLYQLLEEIRELALLDVTEDIRT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcacggagaaggtgctgcagctgcgggggcagcagggccgcgccgtgcgggtg
gtgcgggagcattacctgcgccccgacgtgccgtgctgcagcgccctgtgccgcagcgcc
cagtgccgcgccgcctgcgcccgcgatggcaaattgttatcagatgatgtgacccactac
gttgtccccgactgcaaggttgttcaggagtacctggagatcctggaatttccagagctg
aaaggaattatttttatgcaaacagcttgtcaggctgtgcagcatcagaaaggacgcaga
cagtacaacaagttacgaaatctattgaaggatccccgtcatgactgtactgtgtttgct
aatgaattccaccagcactgctacctgcccagggagaagggagaatccatggagaagtgg
cagaccaggaatatttacaatgcagcagcctggtaccacaaccactgcctgggtcagatg
ccagttgttatggtaacagaagatgaagatgccatcaggcagtacggaaatgaaacagaa
ggagtgtttgtgatttccttcaagaattacttggataacttctggcctgacctaaaggct
gcccacgagctttttgactccatagtccaagctcggcgtgaacgggagagtgaaagccaa
gagaaccatggaaaagaatatcctgagcacttacctgtggaaatattggaggctgggatc
aaatctggaagatacctacagggtacactgaatgtcaataagcaccgagcacagctggaa
gcttttgttcggcttcagggctttggcagcaaaaacacagaacttcaaagtgacatcctt
atttatggggccaaggctcggaatcgtgcaatccacggggatgtggttgtggttgagttg
ctacctgtgcatgaatggaagggaaggactgttgccctctgtgaaaatgagactgaggac
aaagcacctgcagacaccacaggtgaccctatgcccacaggtaaagtagttggaatcatc
caaaagaactggagggattatgtggtcactttcccctctaaagaagagagccagtcccag
ggcagaaatgctcagaaagtccttgtaacaccttgggattaccgaattcccaaaatccgg
atcagcactcagcaggctgaagctttacaggagtacagagttgtcgtgcgcatcgattcc
tgggagtcgacttcgctgtatccaaacggacacttcgtgagagtgctggggagaattgga
gatctcgagggggaaatcgcagctattctggtggagaacagcatttgtgctgcccctttc
tcagaaatccagatgagtgaaatgccagtgagttctccaaagaatccatggaaagtgagt
ccagaggaggcaaaaaaacgccttgacttgagagatacccacctgatattcagcattgac
cccaagggctgtgaggatgtggatgatgctctctctgtcaggactctgcccaacgggaac
cttgagctgggggtgcacattgcagatgtcactcacttcgtggcagcaaattcctacact
gatgttgaggccagagcaagggccaccacatattacctggcggaccggcgctatgacatg
ctgcctgctgtcctcagcgctgacctgtgctccctcctcagcggagtggacagatatgct
gtgagcgtcttgtgggagctggagaaggaatcattcgagacgctgagggttcagtacagc
agaaccctgatccgctctgcctacaagctggagtacgagacagcccaggcactgctggat
ggggacaccagtgtggtgggggatatcgtggagctgcaaagcctggatgagggcacgagg
cagaagaagctggctgagctggtttgggctatatccaagctcaccgacatagcgcgacac
gtccgggccaagcgggacaggtgcggcgcgctggagctggaagggatcgagatccgcgtg
cagctggatgacagacggaatatccatgacctcatccccaagcagccgctggaagtgcac
gagaccgtggcggagtgcatgatcctggccaaccactgggtggcgaaaaggatttccgag
gattttccccaccaagctctgctgcggcagcaccctccaccacggcaggaattcttcact
gagcttcgggaatgtgccagtgccaaaggcttctccatagacacacggtccaacaaggct
ttggctgagtctctggacagagcaaacgacccctcggatcccattgtgaacaaactgctg
cgctccatggccacccacgccatgtccaacgccctgtacttctctactggctcttgtcct
gaggagcagttccatcattatgggctggccctggagaagtacactcacttcacttctccc
atcaggagatacgctgacatcattgtgcacaggctcttgatggcagcgtcgctgagggga
accacaggggatgttaaggacaacatcatcagtaacaaggatctggaggaactgtgcaga
cacatcaataacaggaaccgggcagcccagcgtgctcagaaacaatccacagagctcttc
cagtgcatgtatttccgagacaggagcgccgagagcgacgagcgctgcgtggccgacggc
gtcatctactccatccgcaccaacggcgtgctcgtcttcgtgcctcggtatggaatcaaa
ggtgcagcctacatgaaaaacaaagagggcttggtcatctcctgtcaaggggctgggagc
tgtcagtggaagcctggatccctccatcgctctcagcataaaatcacctccactacaact
actggggactcagtgactttgagtcttttcgatcacatcacagtgagaatcctggtgcag
agttcgcgctgccacgccgagagcatcaagctggagatcatcaggaacgcgccgcaccac
actgcggacacagaggctgcccacaggagctcccacgtggtgaggtctgacttggtgaaa
gaagtcagccagtatgcagaggaggcccagcgtgcccaagagagagccagggtagaagtg
atggatgaggagtcccgggagttctgccagaccaaggggcccagcctgtaccagctgctg
gaggagatccgggagctggcgctgctggatgtgacagaggacatcaggacttga
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integrated database retrieval system
