Frankia alni: FRAAL6362
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Entry
FRAAL6362 CDS
T00384
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP+] (SSDH)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
fal
Frankia alni
Pathway
fal00250
Alanine, aspartate and glutamate metabolism
fal00310
Lysine degradation
fal00350
Tyrosine metabolism
fal00650
Butanoate metabolism
fal00760
Nicotinate and nicotinamide metabolism
fal01100
Metabolic pathways
fal01120
Microbial metabolism in diverse environments
Module
fal_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
fal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
FRAAL6362 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FRAAL6362 (gabD)
00310 Lysine degradation
FRAAL6362 (gabD)
00350 Tyrosine metabolism
FRAAL6362 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
FRAAL6362 (gabD)
Enzymes [BR:
fal01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
FRAAL6362 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
FRAAL6362 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
FRAAL6362 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
CAJ64985
RhizoBase:
FRAAL6362
UniProt:
Q0RC43
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Position
6917704..6918930
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AA seq
408 aa
AA seq
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MRDRSEHLARLVTLEMGKLIRHSRAEIDLSARILQYYADKAPVLLADEPLDFRDGSATVI
NDPLGVILGVQPWNFPVYQTVRFAAPNLVLGNTILLKPASNTPQSALAVEQLFADAGAPR
GVYTNLLIPGREVYRVIESDVVRGASLTGSDRAGVSVGETAGRNVKKSVLELGGSDPFIV
LDDNNLDRTVEAALIGRLHNMGQSCVSAKRVIVISEVFDRFVTALAERMLELVPGDPVDE
ATTLAPVCSEPAAQTLVDQVRDALDKGATAVVGGGHVDHPGAFVQPTVLVGVTPKMRAYH
EELFGPIAVVYRVQDDDQAVSLANDSPYGLGGAVFSSDISRARAVASRIESGMVWINHPT
SSEPELPFGGIKRSGYGRELSHLGIKEFANRKLIVTMGTDAPITDALG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgatcgctccgagcacctggcccgcctggtgacccttgagatgggcaagctcatc
cggcacagccgcgccgagattgacctttccgcgcggattctgcagtactacgccgacaag
gcccccgtgctgctcgccgacgagccgctggatttcagagacggttcggccactgtcatc
aatgatccactgggggtgatccttggcgtccagccctggaacttcccggtttaccagacc
gtccggttcgcggcgcccaacctggtgttggggaacaccattctactcaagcccgcaagc
aatacgccacagtcggcgctggccgtggagcagctgttcgccgacgcgggcgcaccgcga
ggcgtgtacaccaacctcctgattcccggccgcgaggtctaccgggtgattgagtctgat
gtcgttcggggcgcatcgctgaccggaagcgaccgggccggcgtcagcgtcggtgagacc
gccggccgaaacgtgaagaagagcgtcctcgagctgggcggcagcgacccgttcatcgtg
ctcgacgacaacaacctcgaccgcaccgtcgaagcggccctgatcggccgcctgcacaac
atggggcaaagctgtgtgagcgccaagcgggtgatcgtgatatccgaggtattcgaccgg
ttcgtgaccgcgctggccgaacggatgctcgaactggttccgggcgaccccgttgacgag
gccaccacactggcaccggtgtgctccgagccggccgcccagacgctggtggaccaggtc
cgcgacgcgctggacaagggagcgaccgcggtcgtcggcggcgggcacgtcgaccacccc
ggagcgttcgtgcaaccgacggtcctcgtcggcgtgacgccgaagatgcgcgcctatcac
gaagagctgttcgggccgatcgcagtcgtctatcgggtacaggacgatgaccaggcggtc
tccttggcgaacgactcgccttacggtctcggcggtgcggtgttcagcagcgacatctcc
cgggcgcgtgcagtcgccagccggatcgagagcgggatggtgtggattaaccatccgacg
tcatccgagccggaactgcccttcggcggcatcaagcggtccggctacggccgggagctg
tcccacctcggcatcaaggagttcgccaaccggaagctgatcgtgacgatggggacggac
gcgccgatcaccgacgctctgggctga
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