Flavobacterium ammonificans: SHINM13_18620
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Entry
SHINM13_18620 CDS
T08737
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fao03110
]
SHINM13_18620 (clpB)
Chaperones and folding catalysts [BR:
fao03110
]
Heat shock proteins
HSP100
SHINM13_18620 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
Sigma54_activat
nSTAND3
AAA_22
AAA_7
AAA_14
AAA_18
Zeta_toxin
IstB_IS21
Mg_chelatase
TniB
NACHT
AAA_3
ATPase_2
AAA_24
ResIII
DNA_pol3_delta2
T2SSE
AAA_28
Roc
TsaE
Torsin
NBD_SMAX1
RsgA_GTPase
DUF6092
AAA_25
HTH_Crp_2
Cep57_CLD_2
Motif
Other DBs
NCBI-ProteinID:
BDB57566
LinkDB
All DBs
Position
2155464..2158067
Genome browser
AA seq
867 aa
AA seq
DB search
MNINKFTTKSQEAIQLSQQIAQGLGQQQIENEHLFKALLEVDENVTPFLLKKLNVNVPLF
KQILESTIQSFPKVSGGDIMLSRTANATLNEAEILAGKMNDEFVSVEHLVLAIFGSKSKI
AQILKDQGVTEKELKAAIEEMRKGERVTSASAEETYNALNKYAKNLNDLARSGKLDPVIG
RDEEIRRVLQILTRRTKNNPMLVGEPGVGKTAIAEGLAHRIVDGDVPENLKDKIIFSLDM
GALIAGAKYKGEFEERLKSVVKEVTAADGDIVLFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYFEKDKALERRFQKVIVEEPDTESAISILRGIKEKYETHHK
VQIKDEAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLRMEINSKPEELDVLDRKIMQL
EIEIEAIKREKDESKLKVLGMELANLKEDRNEIYAKWKSEKDVVDNIQAVKTEIEDFKYE
AERAERDGDYGKVAEIRYGKIKEAQERLDALVKQLQENQSGTSLIKEVVTREDIAEVVAK
WTGIPVMKMLQGEREKLLHLEAELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGTFL
FLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQL
TEAVRRKPYSVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS
QIIQDKFENLKGGIEAATESAKVEVLGLLKQTVRPEFINRIDEIVMFTPLTHANIAQIVG
LQLKSVTKMLAQQGITMDATPEAITYLSEKGYDPQFGARPVKRVIQREVLNQLSKEILAG
SIKTESIILLDAFDGQLVFRNQGELVS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaataaatttactactaaatcgcaagaggccatccaactttcgcaacaaatc
gcgcaaggattgggtcagcaacaaatcgaaaatgaacatcttttcaaagcgcttttggaa
gtcgacgaaaatgtgacgccttttctattgaaaaaattaaacgtgaatgtcccgcttttc
aaacaaatcttggaaagtaccattcaaagttttccaaaagtttcggggggcgatattatg
ttgtccagaacagctaacgctactttgaacgaagcggagattttagcaggaaaaatgaac
gacgaatttgtttcggttgaacatttggtattggcaatttttggttccaaaagtaaaatc
gctcaaatcctaaaagaccaaggcgtaactgaaaaagaattaaaagccgccattgaagaa
atgagaaaaggcgaaagggtgacctctgcctctgccgaagaaacctacaacgccttaaac
aaatatgccaaaaacctgaatgatttagctcgaagcggcaaactagatcctgttattggt
cgtgatgaagaaattcgtcgtgtgttgcaaattttaactagacgaactaaaaacaaccca
atgctagtgggcgaacctggtgtaggtaaaacagccattgcagagggtttagcgcaccga
attgtagatggcgacgtacccgaaaatctaaaagataaaattatcttctctcttgacatg
ggcgctttgattgcgggtgccaaatacaaaggagaatttgaagaacgtttgaaatcagtg
gtgaaagaagttactgctgccgatggagacattgtacttttcatagacgaaattcacact
ttagtaggtgctggcggtggcgaaggagccatggatgccgctaatattctgaaacccgct
ttggcgcgtggcgaattgcgtgctattggtgcaacgactttggacgaataccagaaatat
tttgagaaagacaaagccctagaaagacgtttccaaaaagtaatagtggaagaacccgat
accgaaagtgctatttctatcttacgtgggatcaaagaaaaatacgaaacgcaccacaaa
gtgcaaatcaaagacgaagctattattgcagcggtagaattatcgcagcgttatatcacc
aatcgttttttacctgataaagccatcgatttaatggacgaagcggcttctaaattgcga
atggaaatcaattcaaaacccgaagaattagacgttttggatcgaaaaatcatgcaatta
gaaatcgaaattgaggccatcaaacgtgaaaaagacgaaagcaagttgaaagtcttggga
atggagttagccaacttaaaagaagaccgcaacgagatttatgccaaatggaaatcggaa
aaagatgtggtagataacatccaagccgtgaaaaccgaaattgaagacttcaaatacgaa
gccgaacgtgcggaacgagatggcgactatggaaaagtagctgaaattcgttacggaaaa
atcaaagaagcacaggaacgtttggatgctttggtaaaacaattgcaagaaaatcaatca
ggtacttccttgatcaaagaagtcgttacccgagaagatattgccgaagtagtagccaaa
tggactgggattccagtgatgaaaatgctacaaggcgaaagagaaaaactcttgcatttg
gaagccgaattgcacaaacgtgtagtgggacaagaagaagctattgaagcggtaagtgat
gccgttcgtagaagtcgcgcgggtttacaagacatgaaaaagcctgttggtactttcctt
ttcttaggaacaacgggtgtgggtaaaaccgaattggcgaaagcattagccgaatacctt
ttcgatgatgaaaatgccatgacgcgaattgatatgagcgaataccaagaacgtcactct
gtgagtcgtttagtgggtgcgcctccaggttatgtgggctatgatgagggcggacaattg
accgaagccgtgcgcagaaaaccctactctgtaattttgttggacgaaattgaaaaagcg
catccggatacgtttaatatcctgctacaagtcctagacgaaggacgtttgacggataat
aaaggacgcttggccgacttcaaaaacacgattatcatcatgacatcgaatatgggtagc
caaatcattcaagataaattcgaaaacttgaaaggcggaattgaagcggcaacagagtca
gctaaagtggaagtgttaggtttattgaaacaaaccgtacgacctgaattcattaatcgt
attgacgaaattgtaatgtttacacctttgactcatgctaatattgctcaaattgtaggt
ttacaactgaaatcggtgaccaaaatgttggcgcaacaaggcattacgatggacgctact
cctgaagcaataacctatttgtctgaaaaaggatacgatccgcaatttggagccagaccc
gtaaaacgtgttattcaaagggaagtattgaaccaattatctaaagagatattggcaggt
agcatcaaaaccgaaagtatcattcttttagacgccttcgacggacaattggtctttaga
aatcaaggcgaattggtttcttaa
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