Fopius arisanus: 105270081
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Entry
105270081 CDS
T07645
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
fas
Fopius arisanus
Pathway
fas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105270081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fas03019
]
105270081
Messenger RNA biogenesis [BR:
fas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105270081
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105270081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
105270081
NCBI-ProteinID:
XP_011309087
UniProt:
A0A0C9QII0
LinkDB
All DBs
Position
Unknown
AA seq
2404 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNYRGSAEEITFLVRWKGLEADRHLLRCLFSYVDFSTG
EPPSTSSKDYYQVQLLKQECNNHLGKPLLISNLTYAIDHPLHQQKTLTPSPKFFHNLRRV
LNLTLVQQVVVTLTLRHSSSSELRQLALEDLRKNLPELIKNYTNTENPSKQQEEGLHDSS
PEVLHLILSQALDPNNSFNLPPDSVEKFLKNLRRDFPRELVPVVLAPLIYPNEGELYPNI
QSNFVMAGSQMDSSSLVELIMELGYGFTASVEECRAALANLGAREISPLAAARVLAHMAR
TCTGLEDAGGLQAFWGNTSANSDSNKDKSSDGSTTPTTWNVEVFIQTLKDIQSTLSWSEV
IVKLDHLEFHIKDRQGLNLLITGLRLGLQHQGYPLDMFPVELFYRHWDNIEGQFSLIQQI
LKSPDIFCFADYPYHQVTVDVLKSIPEGDSKEAKTWNSLNVVELLLHMAERGLYGPVQEI
FKWPIQHCPDVLILALLQISPPLTILRQELLTTLMPIFLGNHPNSAVILHHAWHANNTKI
KTIIMHSMAEWYLRGDHDQTRLSRILDVAQDLKALSTLLNAQSFPFMIDLACLASRREYL
KLEKWLTDKIRDHGEAFVAVTVKFLQRRCPQVMGAGMKEDSSLPKASQLPQETLTTILAC
LQGCAGSVSPECSETIMTMVQNCSLMLQKGTMNRPPPPGVLRHPVLDAFNPAKLANPLFS
SKPVDNIGNISSSLASMGIAPTSSTFNLPGALGPLVSAPGSPSRLMGPSPNQFPMLPISS
QLHSGPVGTQGPSVLPGGSTIGGLGRLVPPTGIEKTRIPDFSNLFPDVSQNVSKEIEDEA
NSYFQRIYNHPPHPTLSIDEVLDMLKKFQDAGTKREREVFHCMLRNLFEEYKFFPQYPDK
ELHITAELFGGIIERGLVNSYVTLGLALRFVLDALRKSEGSKMYYFGVVALDRFKGRLKD
YQTYCEHVRTIQHFSEFPAHLIEYIEYGLQGQEPPHKPQGPVLPKNLAALLAPVTTQPPY
KTITTTTITTSTTQVQVKSTTTATTSLSARPSIANATNIDTLLVATDKEEKITCPPETLQ
DKTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCL
KAPEINKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDID
LKSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTIAIMNVLAELHQEPDLK
LNLKFEIEVLCKNLSIDVAELNPAVYLKDPDKLRNLEYQLSQPNKKAEAPTNQQPQAGPM
EELGGSTQAPGTISQPSQPANTTPSLPTGPPEPRFNYMDISVTNISNIAQHMTINNQLPL
FQTHPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRSAAR
HMVRNLTAGMAMITCRDQILASISTNLKNAFLTAMGSTPQQKEVAEQAANVVAADNMELA
CAFVQKTAIEKAMPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKAGGV
TPQQMAVYEEFARNIPGFLPLSERDTQALFIPKPIAEPTVQASFPTNPAGVAIATPQQVA
VYATVNNDEIGSMLEKLAGEVELLISAMGPAVPPPHHASLHSLLESVILTRRSRDAGAAM
ALLKKAVEGLLDGPTISSGVIDGEIILRCREVHLRILKCLQDPRAYGMQWTNKHSTRCLT
ECRDEFRYNFEAVDCLIRSHLVSFPQFDIALAQAMDAGNAMATAFAMQLVQMYLIDERQT
THVTESDLYNTIEILGRMIQHRAPPEGISLFRLTNLIESLRANQDPGVLADRPSAGPTAH
IHSGILQVRARDFDDPPGFMEKTEYLLREWVQMHHSPTHARDPTKAFGIFVHQMNIHGIL
KTDDLITRFFKLSTQMCVDLCYRALAETNVAPSVIRAKCFHSLDAFVRLVALLVKHSGDT
TNTHTKINLLNKVLGIVAGVLLQDHELRTTDFQQLPYHRIFIMLFLELCAPEPVLEAVNF
QVLTAYCHTLHILRPAKAPGFCYAWLELVSHRVFIGRMLAITPQQKGWGPYAQLLIDLFK
YLAPYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLIL
SAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTF
LSELRSNLQVSQEPGMRYNILLMNALVLYVGTQAIAFIRNKGHTPNMSTIAHSAHMDIFQ
NLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERL
IVNRPHPWGLLITFIELIKNRNYKFWDHEFVHCAPEIEKLFESVARSCMVQKQVQPTPEP
EMPE
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttatcttttactttgtcacaaataagttatttggttgctaatttg
aataagaaaaattatcgtggcagtgccgaggagataacattcctggtacgttggaaaggt
cttgaggcggacagacacttgctgcgctgtttgttctcttacgttgacttttcaactggt
gagccacccagcactagctccaaggactattaccaagtgcaactgctgaaacaggagtgc
aataatcacctggggaagccactgctgatatctaacctcacatacgcaatcgatcatcca
ctgcatcagcagaaaacattgacaccatcgccaaagttttttcacaatcttcgtcgagtg
ttgaatctgacactagttcagcaggtggtcgttaccctgacccttcgtcactcatcatca
tcagagctacgtcagcttgccctcgaggatctccgcaagaatctcccagagttaataaaa
aactatacaaacacagagaatcccagcaagcagcaggaagagggtctccacgactcgtcc
cccgaagtcctccacctgatcctctcccaggccctagatcccaacaacagcttcaatctt
cccccggactcggtggagaaattcctgaaaaatctgcgtcgtgattttcctcgagagctt
gtaccagtggtgctagcaccactcatctatccaaacgagggggaactctatcccaatatc
cagagcaatttcgttatggctgggagtcagatggacagtagttcactggttgagctcata
atggagttgggttatggatttacagcgagtgttgaggagtgccgagcagctctggcgaat
cttggagctagggagatatcaccactggctgctgccagagttctagctcatatggcgaga
acctgcactggtcttgaggatgctgggggccttcaggcattctggggcaacacatcagcc
aattcagactcaaacaaggacaaatcctcggacggcagcaccacccctaccacctggaac
gtcgaagtttttattcaaaccctcaaggatatccagtcaactctctcctggagcgaagta
atcgtcaaactggatcacttggagtttcacataaaggatcggcagggtctgaatcttctc
atcacaggtcttcgcctgggactccagcatcagggttatcccctggacatgtttccagtg
gagctgttctacagacactgggacaatatcgagggacagttctcactgatccagcagatc
ctcaagagtccagacatcttctgcttcgctgattatccttatcaccaggtaacagtggat
gtcctgaagtcaatacccgagggggacagcaaagaggccaaaacctggaactctctcaat
gtcgtcgaacttcttctgcacatggctgagaggggcctctatggccctgtccaggagata
ttcaagtggccaattcaacactgccctgacgttctcattctcgctctactccagatcagt
ccacccctaacgattctcaggcaagagctactcaccaccctcatgcccatttttctggga
aatcatcccaattcagcggttattcttcatcacgcctggcacgccaataataccaaaata
aaaacgattatcatgcactcgatggcagagtggtacctgcgaggggatcacgatcagacg
agactctccagaattttggacgtcgctcaggacttgaaagcactatcgactctcctgaat
gcccaatcttttcccttcatgattgatctcgcatgtttagcctcacgaagagaatatctc
aagctggagaaatggttgactgataaaattcgagaccatggcgaggcttttgtagctgtg
accgtcaagttcctccagaggaggtgccctcaggtgatgggggccggcatgaaggaggat
tcgagtctgccgaaggccagtcaactccctcaggagacattgacaacgattttagcgtgc
cttcagggttgcgctggcagtgtctccccggagtgctcagaaaccataatgacgatggtg
cagaattgcagtctgatgctgcaaaaaggaacgatgaatagacctccaccacctggagtc
cttcgtcacccagttctcgacgcctttaatccagcaaaactggctaatcccctgttctca
tcgaaaccagtggataatattgggaatatcagctccagtttggcatcaatgggaatagcc
cccacttcatccacgtttaatcttcctggcgcccttgggcccctggtttcagccccagga
tcaccatcacgactgatgggtccctcgccaaatcaatttccaatgctaccaatttcctct
caacttcactcaggccctgtgggtactcaggggccctctgttctcccaggaggctcgaca
ataggtggactaggtcgtttggttccccccactggcatcgaaaaaacaagaattccagac
ttctccaatctctttccagacgtttcacaaaatgtttcgaaggagatcgaggacgaggcc
aacagctacttccagaggatttacaatcatccccctcatcctaccctatccatcgacgag
gttctcgatatgctgaagaagttccaggatgctggaacgaagagagaacgagaggtgttc
cattgcatgctgagaaatctttttgaggagtacaaattcttcccgcagtatcccgacaaa
gagcttcatataacagctgaattgttcggtggaataatcgaacgaggacttgtcaacagt
tacgtgacccttggactagccctgagatttgtcctggatgccctgaggaagtctgagggc
agtaaaatgtattacttcggagtggtggccctcgacaggttcaagggacgcctcaaggat
taccagacgtattgcgagcacgtgagaacgattcagcacttttcagaattcccagcccat
ctgattgagtacatagagtacggcctccagggacaagagccaccgcacaagccacagggg
ccagtactccccaagaatttggcggctcttttggcgccagtgacaactcaacccccttac
aagacaatcaccaccacaacaataaccacgagcaccacacaagtccaggttaaatccaca
acgacagctacaacttcattgtcagctagaccatcaatagccaatgccacgaatattgac
actcttctagttgccactgacaaggaggagaagataacgtgtccccctgagactcttcag
gacaaaactgccttcatcttcaataacctgagtcaactgaatcttcaacagaagtgcgac
gagatcagggaaatcgttaccgaggagtactggccctggatggcgcagtatctcgtgatg
aagcgagccagcatcgagctaaattttcacgcactgtactccaactttctggactgcctc
aaagctccagagatcaataaaatggtcaccagggagaccttcagaaatatcaaggtgctg
ctgaggagtgacaaggggattgccaatttctctgatcgttcactcctgaaaaacctggga
cactggctgggaatgctgactctaggtcgaaataaaccaattctccaggtggatatagac
ttgaagagcctcctcgtcgaggcataccacaagggccagcaggagctcctctacgtcgta
ccattcgtcgccaaagtcctggagagctgtgccaagagtcgagtgtttcgacccccgaat
ccctggacaatagcgataatgaatgttctcgcagagctccatcaagagcccgatctcaaa
ctcaacttaaaatttgaaatcgaggtactgtgcaagaatttgagtatcgatgtggctgag
ctgaacccagcggtttacctgaaggacccagacaagctgagaaatctcgagtatcaattg
tcccagccaaataaaaaagcagaggcaccgactaaccaacagcctcaggcaggccccatg
gaggaacttgggggctcgacacaagctccaggaacaatatcccagccatcacaaccagct
aatacaactccatcattgcccacaggacccccagagccgcgattcaactacatggacatc
agtgtcaccaatatctccaacatagcccaacatatgacgataaataatcagctgccactg
ttccagacacatccacacctgaagcaatttgtaagaccagctgtagaacgagcaattcag
gaatggattcacccagtggttgatcgttccattaaaatagccctgaccaccagcgaacaa
atagtacgtaaggattttgcactggaccccgaagaagtgagaatgcgctctgctgcgagg
cacatggtgagaaatttgacagctggaatggcaatgatcacctgcagggatcaaattctc
gcgtcgatcagtacaaatctgaagaatgcatttttaacagcgatgggctcgacaccccag
cagaaagaagtcgctgaacaggcagctaatgtcgttgctgctgataatatggagttggca
tgcgcttttgtccagaagacagctattgagaaggcgatgcctgagatggacaagagattg
ttgaatgaaatagagctgagaaagatagccagacaggaggggagaagatattgtgatcct
ctggctaaatatcaggctgagagaatgcctgaacaaataagattgaaagctggaggtgta
acaccccagcaaatggcagtctacgaggaattcgccaggaatattccaggatttcttcca
ctatccgagagagacactcaagctctgtttatcccgaaaccgatagccgagccgacggtt
caggcgtcttttccaactaatccagcaggtgttgctattgcaacacctcagcaagttgcc
gtctatgcaacagtcaacaacgatgagattggctcgatgctggagaaactcgctggagaa
gttgagctattgatatctgcgatgggacctgcagtaccacctcctcatcatgcatcactc
cacagtctcctggagtctgttatcttgacgagaagatcgagagacgctggggctgcaatg
gcattactgaaaaaagctgttgagggactgctggatggtccgacaatatccagtggagta
atcgatggggagataatcctgagatgtcgagaggtgcatctgagaattctcaagtgtctt
caggatcccagagcctatggtatgcagtggaccaacaaacactccacaagatgcctgaca
gaatgcagagatgaatttagatacaactttgaggctgtcgactgtctgataagatctcac
ctggtgagctttccacagtttgatatcgctctggctcaggctatggatgcaggcaatgcc
atggccactgcttttgcaatgcagcttgtacagatgtacctcatcgatgaacgacagaca
acacacgtcacggagtctgatctctacaacaccattgaaattctcggaaggatgattcag
caccgagcaccaccagaaggcatctctcttttcagattaacaaacctcatcgagtccctt
cgagcgaatcaggatcccggggtactcgctgatcgaccatcagccggccccaccgctcac
attcactctggaattctccaggtccgggcccgggactttgacgatcccccaggattcatg
gagaagactgagtatctcctcagggaatgggtgcagatgcatcactcaccaactcacgca
cgtgatcccacaaaagcctttggtattttcgttcaccagatgaatatccatggaatcctc
aaaactgatgatctcatcacgagatttttcaaactcagcactcagatgtgtgtcgatctg
tgttacagagcgctcgctgagacaaacgtggcaccatcagtcattagagccaaatgtttt
cactcactcgatgcttttgtacgtctagtggctcttcttgttaaacactctggtgacaca
accaatacccacaccaagatcaatcttttgaataaagtcctgggtatcgtggctggagtt
ctcctccaggatcacgagctgagaacaacagacttccaacagcttccctaccacagaatc
ttcataatgctgtttttggagctttgtgcacccgagcctgtcctcgaggctgtcaatttc
caagtgctcacagcttactgtcacacccttcacattctgcgacctgccaaagccccaggt
ttctgctacgcttggttggaactcgtgtcccacagagtcttcattggccgaatgctggca
ataacacctcagcaaaagggctggggtccctacgcccaattgctcattgatctcttcaag
tacctcgcaccatatctgaggaatgcagaactcgcgaaacccgtgactctcctctataaa
ggaacacttcgagttctcctggtgctgttacacgacttcccagagttcctctgcgattat
cattatggattctgcgacgtcattcccccgaactgcattcagatgaggaatctgatactc
agtgcttttcccaggaacatgagactgcctgatcctttcactcctaatttaaaggtggat
atgctccaggagatcgcccatgccccaagggtattgacgaattttgcatcgatgattcaa
ccgttgagtttcaaaaaggagttggattcttatctgaaagccagggctcctgtcactttc
ttgtctgaattgaggagcaatctccaggtgtcccaggagcctggcatgagatacaatatt
cttctgatgaatgctctggtgctgtacgtgggaactcaggcaattgcattcatcaggaac
aagggacacacacccaatatgtcgactattgctcactcagcccacatggatatcttccaa
aatcttgcggttgatctcgacaccgagggacgatatctattcctcaatgctattgctaat
cagctgagatatcccaatagtcatacgcattatttcagttgtactctcctgtatttattc
gccgaggccaatactgaagccattcaggagcaaataactagagttctcttggagagactc
attgttaatagacctcatccctggggactactcattaccttcattgaacttattaagaat
aggaattataagttctgggatcatgagttcgtgcattgcgcacctgaaattgaaaaatta
ttcgaatcagtggcaagatcctgcatggtccagaaacaagttcagccaacaccagagccg
gagatgcccgagtga
DBGET
integrated database retrieval system
