Fopius arisanus: 105273520
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Entry
105273520 CDS
T07645
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
fas
Fopius arisanus
Pathway
fas04382
Cornified envelope formation
fas04512
ECM-receptor interaction
fas04518
Integrin signaling
fas04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fas00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105273520
04518 Integrin signaling
105273520
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105273520
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
105273520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fas04147
]
105273520
00536 Glycosaminoglycan binding proteins [BR:
fas00536
]
105273520
Exosome [BR:
fas04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105273520
Glycosaminoglycan binding proteins [BR:
fas00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105273520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105273520
NCBI-ProteinID:
XP_011314316
UniProt:
A0A0C9PYD3
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
MWPGGGGIASCRRSGSYLLVPVVTCIIGLVLVGWQVPATEAVVCHDNYKCNCKGIKGTPG
FPGIAGPQGPSGAPGDDGLEGPPGPKGEKGAGGEFGGTGEKGHRGDKGMKGFFGDPGLPG
HRGTPGVRGPDGLDGCNGTDGRAGAPGMTGAFGPRGAPGPLGDPGIAGEPGEGGINSQGA
KGVRGDPGYDGPKGDDGPPGYAGESGYPGDVGDFGYRGEPGLPGLTGDQGDTVYGDKGQP
GEPGDRGEPGPINKEWKKNNASEPVPGPPGRKGVRGDYGDRGRKGELGDKGPMGRPGYIG
VKGVKGEQGDDGPRGKQGVTGPSGPAGEKGDKGAPGYAGRDGEDGLDGESGEVGNRGPPG
RQGAPGEKGLYIPELDEIIPGPIGIQGELGPPGEPGQDGTPGRPGLVGYIGPPGLPGPQG
PPGIPGPKGTSEKGEQGDDGLPGPLGPPGPPGRPGIVGPIGAKGFPGVTIIGPPGIDGKP
GFSGLEGPPGDRGDPGPEGPKGFPGKGVRIRGPAGEPGLPGTPGFPGPDGWPGVPGPRGA
KGLHGDDCGVCAPGQPGAKGERGDSGLNGFPGAPGYSGLPGPRGFKGAHGVPGSTGPMGL
QGESGTAGIAGIQGPKGQPGRIVPPPGSKKDSPSGEVGDKGFPGFEGLRGGRGPPGELGD
TGPEGPKGEKGDFGAPGVTGVDGKPGWNGVPGEKGDDADVPIEFLRGDPGVDGVPGVRGP
RGDKGWPGEQGEAASHTARDVKGVKGIKGQSGEPGFDGLKGFQGHDGDEGWPGLPGPQGS
PGISIPGPVGLKGYAGMPGDEGPRGTAGQPGQQGPVGLLGPPGMKGDRGDIGTNLIYGEI
GVRGFYGQKGEFGFEGPAGPRGRTGVDGPKGLRGAKGAPGFEGLPGLQGAKGVRGDSIQG
PRGFPGPPGLSGAPGMLGNVGMTGPDGVSGFDGMKGLKGEIGFHGRRGEDGDIGIQGYPG
MEGIPGVPGKQGEDGDIGEIGDSGQPGWIGEEGSPGAMGLKGPIGESGNPGFPGIQGPVG
LPGITGDIGYDGPPGERGQDAFSGPQGDMGQPGFMGAIGAPGAPGVDGRPGLPGDNGVDS
VGYDGPRGQKGEPGWNGFNGITGLKGEIGDMGSDGLKGEVGDSGDRGRPGSPGINGRPGV
KGEIGPVGPIGWDGIKGQRGFDGDPGLMGRPGMPGDIGPRGRPGFPGAPGLKGMAGDSGL
PSYMDADKGEIGDVGFHGLHGRKGEQGDIGLRGYPGARGMRGDMGYPGPEGFEGLPGLPG
LPGDVGYPGLPGLPGQNPERGEPGLPGFDGRPGIPGQPGQKGAPGEYGPDGPIGIEGEPG
RSFPGAKGLPGDIGPRGYEGRPGTPGLRGLDGFPGATGPKGFRGEPGYAQYGRKGDQGEI
GFAGPDGRHGFKGERGDAGISGATGYPGLKGMQGDTGEPGPIGLPGFDGPKGPKGDRGTS
PYPLFPRKGLQGDDGFPGLIGTPGAPGMMGMPGVDGLPGLEGQRGVDGLPGFPGPDGEDG
PPGPQGPRGTIGYPGVPGFQGPRGEDAPPGPAPSSRGFHFARHSQSEMIPLCPRGTTKLW
DGFSLLHIMGNSHPWAQDLGQAGSCVRKFSVMPFLFCNLNNVCDYAQRNDYSYWLSSTEP
MPMMMTPIPAPEAGRYISRCTVCEAPTRMIAVHSQSMRIPDCPGGWEEAWIGYSFLMHRD
AGAAGGGQSLISPGSCLEEFRTRPFIECRGLGTCNYFSTAISYWLATIEDHEMFRKPQPQ
TLKADHTSRVSRCAVCIRRRIIEDNGNRLKPFTSNGSRYIPPAPVNPHPIQRGPAQPRNF
PGGRIRVPGRRVPNNHRRRGQVRRPTQANSTRSPFTRE
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccgggggtggtggtatcgcctcctgccgtcgaagcggatcgtacctcctggtg
cccgttgtcacctgcatcatcgggctcgtactcgtcgggtggcaggtccccgcgaccgag
gctgtggtatgtcacgataattacaaatgcaactgcaaaggaataaaaggaaccccggga
ttcccgggtatcgcgggtcctcaaggtccctcaggcgctccaggagacgatgggctggaa
gggcctccagggccgaaaggtgaaaaaggagctggaggtgaattcggtggaaccggagaa
aaaggccacagaggagacaagggaatgaagggattcttcggcgaccctggtctaccgggt
caccgtggtactcctggtgtgagaggtcccgatggattggatggatgtaatggaactgac
ggacgagctggtgcccccggaatgaccggagctttcggtcctcgtggtgcccctgggccc
cttggagatcccggaatcgctggagaacctggagaaggtggaatcaactcgcagggggcg
aaaggagttcgaggagatccgggttatgatggaccaaaaggtgacgatggtcctccaggg
tacgcgggagagtcgggttatcctggtgacgtcggtgacttcggctatcgaggtgagcca
ggtctgcctggactgactggcgatcaaggtgatacggtttacggggacaagggacaacct
ggtgaaccgggagatcgaggagagccgggaccgattaataaagagtggaagaaaaataat
gcatctgaacctgtacctggaccacctgggagaaaaggtgtgagaggagattatggggat
cgcggaagaaagggagagctcggagataaaggacccatgggacgacctggatatatcggt
gttaaaggtgttaaaggagagcaaggggatgatggtcctcgaggaaaacagggcgtcact
ggtcccagtgggccagccggtgaaaaaggagacaaaggtgctccaggatacgctggacgc
gatggagaagacggtctcgacggtgaatctggagaagtaggaaaccgcggtccccctggg
aggcagggagcccctggagagaaaggactgtacattccagaactcgatgaaattattcca
ggacctattggaattcaaggagaacttggtcctcctggagaaccaggacaagacggtact
ccagggcgtccgggattagtcggctacattggacctccaggtttaccggggccacagggt
ccaccaggtattcccggaccaaagggaacatccgagaaaggagaacaaggtgacgatggg
ctgccaggaccacttgggcctccaggacctcccggaaggcccggtattgtgggaccgatt
ggtgctaagggcttccccggggttacgatcatcgggccaccgggtatagacggaaaacca
ggcttcagcggattggagggaccacctggtgaccgcggagatccaggccccgaagggcca
aagggtttcccgggcaaaggtgttcgaattcgtggtccagccggtgagccagggcttcct
ggtacaccaggatttcccggtcctgatggctggccaggcgtaccagggccaaggggtgct
aaaggccttcatggagatgactgtggagtatgcgctccaggtcagcctggtgcaaaaggc
gaacgcggtgactcgggtctgaatggattccccggtgccccaggatattctggcttgccg
ggacctcgagggttcaaaggagcacacggagttcctgggagtaccgggccaatgggtctt
cagggagagagtggtacagcaggtattgcgggtatccaagggcccaaaggacaaccagga
cgcattgttccgccacctggttcgaaaaaagactctccatccggtgaagtcggtgacaaa
ggttttcccggattcgaaggcctccgtggaggacgtggtccacccggagaactcggtgac
acaggacctgaaggaccgaagggggaaaaaggagatttcggcgcccctggtgtcacagga
gtcgacggcaaacctggatggaatggagtacctggtgagaaaggggatgacgccgatgtc
ccgatagagttccttcgaggagatcccggagtcgatggagtacctggagtgcggggacct
cgaggagacaagggatggcctggagaacagggagaagctgcatctcacactgcaagagat
gtgaaaggagtcaagggaatcaaaggccagtcaggagagcctggattcgatgggttgaag
ggttttcaagggcacgacggagacgagggatggcccggactccctggacctcaaggatcc
ccaggtatttctattccaggtcctgttggtctgaagggatacgcaggaatgcccggtgac
gaaggtcctcgtggtactgctggacaacccggtcagcaaggaccagttgggcttctggga
ccgccaggaatgaagggagatcgaggagatatcggaacgaatcttatctacggtgagatc
ggcgtacgtggattttacggccaaaaaggagagttcggtttcgagggaccagccggccct
cgcggaaggaccggtgttgacggaccaaagggtctcagaggtgccaaaggagcgcctgga
ttcgaaggactaccaggtctccagggagcgaaaggtgttcgaggtgatagcatccaaggt
ccccgaggtttcccaggtcctccaggattatcgggggcccctggaatgctaggaaacgta
ggtatgaccggtccagatggtgtatcaggtttcgatggaatgaaaggtctgaagggagag
attggttttcacgggcgtcgaggagaggatggagatattggaattcaagggtacccgggt
atggaagggattcctggagtgccgggaaaacaaggcgaggatggagatataggagagatc
ggagattctggacagccagggtggattggcgaggagggatctcccggggctatggggttg
aagggaccgatcggagaatctggaaaccctggattcccaggtattcaaggacctgtgggc
ttgcctggaataactggagatattgggtacgatggtcctcctggtgaacgtggacaggac
gcatttagcgggcctcagggcgacatgggtcagcctggattcatgggagcaattggggca
cctggagctccaggtgttgatggacgtcctggtttgcctggagataatggagtggattca
gtggggtatgatgggccacgtggacagaagggagagccggggtggaatggattcaacgga
ataactggactgaagggtgaaattggagatatgggatcagacggattaaagggagaagtt
ggtgacagcggagaccgagggagacctggaagtccaggaatcaatggaagacctggggtg
aaaggtgaaattgggccagtgggacccatcggttgggatggcataaagggacaacgtggc
ttcgatggtgatcctggtttaatgggtcgtccaggtatgcctggagacattggcccacgg
ggaaggcctggtttccctggtgctcctgggctgaagggaatggcgggtgattctgggctg
ccctcgtacatggacgcggataaaggagaaatcggtgatgtgggattccatgggctacat
ggaagaaagggagagcagggagatataggattgcgaggatatcctggagctaggggaatg
cgtggagatatgggatatccgggtccagaaggttttgaaggtttaccaggactccccgga
cttcctggtgatgttgggtaccctggattgccaggacttcctggtcaaaatcccgaacgt
ggtgaaccaggtctgccaggatttgatgggcgtccaggtattcctggacagcctgggcaa
aagggagccccaggagaatatgggcctgacggaccgataggtatcgaaggagaaccagga
aggagtttccccggagcaaagggtctccctggtgatattggcccaagaggatacgagggt
cgccctggaactccagggttacgaggactcgacggattcccaggagcaaccggtcccaaa
ggttttcgtggagagcccggatatgcgcaatacggtcggaaaggagatcagggtgaaata
ggttttgcggggccagatggcaggcatggatttaagggtgagagaggtgatgctggtata
tcaggggcaactggttaccctgggttgaagggtatgcaaggagatactggagaacctgga
cctattggtttgccaggttttgatggaccgaagggacctaaaggagatcgaggtaccagt
ccctaccctctatttcccaggaaaggacttcaaggagacgatggattcccaggcttaatt
ggaacacctggagctccggggatgatgggaatgccaggggtcgatggtctgccaggtctt
gagggtcagcgtggagtagacggacttccaggatttcccggtcccgatggagaagacgga
ccgccaggacctcagggtccacgtggtaccattggttacccaggagtcccgggtttccaa
ggacctcgtggagaagacgccccaccaggacccgcacccagcagccgtggattccacttc
gccagacactcacaatctgaaatgattcctctttgtccacgggggaccactaaattgtgg
gacggattctcattactccatattatgggtaattcacatccatgggctcaagatcttgga
caagctggaagttgtgtacgaaaattctcggtgatgcctttcctgttctgcaatctgaat
aatgtttgcgattatgcccagaggaatgactacagctactggttaagttcaacggaacca
atgccaatgatgatgacaccaattccagcaccagaggctggaaggtatatctctaggtgc
accgtgtgtgaagccccaaccagaatgattgcggtacatagtcagtcgatgcggattcca
gattgccctggtggatgggaagaagcctggattggttacagtttcctcatgcatagggac
gcaggtgcagcaggcggtggccaatcgctaatatcgccgggttcatgtctcgaggaattc
cgcactcgccccttcatcgagtgtcgcggtcttggtacatgcaactacttctccaccgca
atctcctactggcttgcaaccattgaggatcacgagatgttccgtaaaccacagcctcag
accctaaaagccgatcacacgtcacgagtcagcagatgtgccgtatgcatacgacgccga
ataattgaggacaatggcaacaggctgaaaccctttacctccaatggctcgcgctacatt
ccaccagcaccagttaacccacaccccattcagagaggtccagcacagcctcgcaacttc
cctggaggtagaattcgagttcctggtagacgcgttccaaacaatcatcgtcgaaggggc
caagttcgaaggcctacccaggctaactccactcgaagtcctttcaccagagaatga
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integrated database retrieval system
