Flavobacterium bizetiae: L0669_13315
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Entry
L0669_13315 CDS
T08699
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fbi
Flavobacterium bizetiae
Pathway
fbi00040
Pentose and glucuronate interconversions
fbi01100
Metabolic pathways
fbi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L0669_13315
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L0669_13315
Enzymes [BR:
fbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L0669_13315
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
OST_IS
Motif
Other DBs
NCBI-ProteinID:
UTN02298
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Position
complement(3065445..3066557)
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AA seq
370 aa
AA seq
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MKIKSTISVFLLTLILGFASCNTEEVASSANEESASIEATTTVSGNVTSKIGNCAQVPGW
ASQNGSVTGGGSAAETNVTTYAQLKSAIENSSVKVIKVTGTITVTTRLSLQDQTGKTIYG
ANGAKLVSTNQTKDASGIINIKRCKNLIIRNLIFEGPGAYDTDGWDNAILDECTNVWVDH
CEFRDGVDGNFDIKNKSDYITVSYTKFGYLKAPKPGGSGGSDDHRYSNLIGSSDGATGDR
GKLRITFARCWWAPGCKERMPRVRFGKVHLVNNFFNSTVSNKCIAAGFEADIRVEANVFE
GVKTPIDLMTGYTAVTAVDNVFTNTTGNQAGSKTSFTPPYSIVKLDKTAVKADVSANAGA
TLGGNICGSF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaaatcaacaatctcagtgtttctactaactctgattttaggttttgcatcg
tgcaacaccgaagaagttgcttcgtctgccaatgaagaaagtgctagtattgaagctact
acaactgtatctggtaatgtaacctcaaaaattggaaattgtgctcaggttccgggatgg
gcttcgcaaaacggaagtgtaactggcggaggatctgccgctgaaacaaatgttactact
tatgcccagttgaaatctgccattgaaaacagttctgtaaaagtgatcaaagttaccggt
actattacggttacaacaagattgtcattacaagatcaaaccggaaaaactatttacggt
gcaaatggcgccaaattagtttcgacgaaccaaactaaagatgcgtccgggattatcaac
atcaaaagatgcaaaaacttaatcatcagaaatcttatttttgaagggcccggagcttat
gatactgacggatgggataatgcaattcttgacgaatgtacaaacgtatgggtagatcac
tgcgaattcagagatggtgttgacggcaacttcgacattaaaaacaaatctgattacata
acagtttcgtacacgaaatttggctacctaaaagctccaaaaccaggtggatcaggaggt
tctgatgatcacaggtattcaaacctaattggttcaagcgacggtgctacaggagaccgt
ggaaaattaagaattactttcgctcgttgctggtgggctcctggatgtaaagaaagaatg
ccaagagtacgttttggaaaagtgcatttagtaaacaacttcttcaacagtacagtaagc
aacaaatgtattgcagcaggttttgaagctgatattcgtgttgaagcaaacgtttttgaa
ggtgtaaaaaccccaatcgatttaatgacgggttatacagctgttacagcagttgataat
gtttttaccaatactacaggaaatcaggcaggaagtaaaacttctttcactcctccttat
tcaattgtaaaactggataaaacagctgtgaaagctgatgtttcggctaatgcaggagca
actttaggcggaaacatttgcggatcgttttaa
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