KEGG   Felis catus (domestic cat): 101089823
Entry
101089823         CDS       T02385                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
fca  Felis catus (domestic cat)
Pathway
fca03410  Base excision repair
fca04140  Autophagy - animal
fca04217  Necroptosis
fca04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101089823 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101089823 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    101089823 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    101089823 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fca03036]
    101089823 (HMGB1)
   03400 DNA repair and recombination proteins [BR:fca03400]
    101089823 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fca04147]
    101089823 (HMGB1)
Chromosome and associated proteins [BR:fca03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    101089823 (HMGB1)
DNA repair and recombination proteins [BR:fca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101089823 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     101089823 (HMGB1)
Exosome [BR:fca04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101089823 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 101089823
NCBI-ProteinID: XP_003980327
UniProt: M3VUA1
LinkDB
Position
A1:complement(9738599..9744913)
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEEEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatatcccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcagccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcggcaaaaaagggagtcgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaggacgaggaagatgaagaggatgaggaagaggag
gaagatgaagaagatgaagaagaagaagaagatgatgatgatgaataa

KEGG   Felis catus (domestic cat): 101096658
Entry
101096658         CDS       T02385                                 
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
fca  Felis catus (domestic cat)
Pathway
fca03410  Base excision repair
fca04140  Autophagy - animal
fca04217  Necroptosis
fca04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101096658
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101096658
  09143 Cell growth and death
   04217 Necroptosis
    101096658
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    101096658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fca03036]
    101096658
   03400 DNA repair and recombination proteins [BR:fca03400]
    101096658
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fca04147]
    101096658
Chromosome and associated proteins [BR:fca03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    101096658
DNA repair and recombination proteins [BR:fca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101096658
   MMR (mismatch excision repair)
    Other MMR factors
     101096658
Exosome [BR:fca04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101096658
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_box_5 NOA36
Other DBs
NCBI-GeneID: 101096658
NCBI-ProteinID: XP_044917686
LinkDB
Position
B4:complement(76043008..76043649)
AA seq 213 aa
MGKGDPKKPRGKMSSYAFFVQTCXEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
TKKKKEEEEDEEDEEDEEEEEDEKDEEDDDDDE
NT seq 642 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgctgagaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaagttt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttacatccct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgtccaaaaatcaaaggagaacatcctggccta
tccattggtgatgttgcaaagaaactgggagagatgtggaataacaccgctgcagatgac
aagcatccttatgagaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgacgcagcaaaaaagggagtcgtcaaggctgaaaaa
accaagaaaaagaaggaagaggaggaggatgaggaagatgaagaggatgaggaagaggag
gaagatgaaaaagatgaagaagatgatgatgatgatgaataa

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