KEGG   Felis catus (domestic cat): 101094793
Entry
101094793         CDS       T02385                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X2
  KO
K14299  nucleoporin SEH1
Organism
fca  Felis catus (domestic cat)
Pathway
fca03013  Nucleocytoplasmic transport
fca04150  mTOR signaling pathway
fca05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:fca00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101094793 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    101094793 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101094793 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fca03019]
    101094793 (SEH1L)
   04131 Membrane trafficking [BR:fca04131]
    101094793 (SEH1L)
Messenger RNA biogenesis [BR:fca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101094793 (SEH1L)
Membrane trafficking [BR:fca04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    101094793 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 101094793
NCBI-ProteinID: XP_003995047
LinkDB
Position
D3:complement(31903998..31937695)
AA seq 360 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVTGNSQQGNSNPSLGSNIPNLQNSLNGSSSGRKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttgtggcgcgcagtatcgcggcggaccataaggatctcatccatgatgtctctttc
gacttccacgggcgacggatggctacctgctccagtgaccagagcgtcaaggtctgggat
aaaagtgaaaatggggattggcattgtactgctagctggaagacacatagtggatcggtg
tggcgtgtgacatgggcccatcctgaatttggacaggttttggcttcttgttcttttgac
cgaacagctgctgtgtgggaagaaatagtaggagaatcaaatgataaactgcgaggacag
agtcattgggttaagaggacaactctagtggatagcagaacatccgttaccgatgtgaaa
tttgctcctaagcatatgggtcttatgttagcaacctgttcggcagatggtatagtaaga
atatatgaggcaccagatgttatgaatctcagccagtggtctctgcagcatgagatttca
tgtaagctaagctgtagttgtatttcttggaacccttcaagctctcgtgctcattccccc
atgatagctgtaggaagtgatgacagtagtccaaatgcaatggccaaggttcagattttt
gaatataatgaaaacaccaggaaatatgcaaaagctgaaaccctcatgacagtcacagat
cctgtccatgatattgcctttgctccaaacttgggaaggtctttccacattctagccata
gcaaccaaagatgtgagaatttttacattaaagcctgtgaggaaagaacttacctcttct
ggtggaccaacaaaatttgaaattcatatagtggctcagtttgataatcataattcccag
gtctggcgagtgagttggaatataacaggaacagtgttagcatcttctggagatgatggc
tgtgtaagattatggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagccctgtcactgggaattctcagcagggaaactcaaatccttccctaggt
tcaaatatcccaaatcttcaaaattcattaaatggatcttcttctggcagaaagcacagc
tga

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