Flavobacterium cyclinae: LOS86_09400
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Entry
LOS86_09400 CDS
T08416
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
fcc
Flavobacterium cyclinae
Brite
KEGG Orthology (KO) [BR:
fcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fcc03110
]
LOS86_09400 (clpB)
Chaperones and folding catalysts [BR:
fcc03110
]
Heat shock proteins
HSP100
LOS86_09400 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
AAA_7
AAA_18
IstB_IS21
Mg_chelatase
ATPase_2
Zeta_toxin
DNA_pol3_delta2
AAA_3
AAA_28
AAA_24
NACHT
Roc
ResIII
T2SSE
Torsin
TsaE
TniB
NBD_SMAX1
AAA_25
DUF4407
DUF87
Motif
Other DBs
NCBI-ProteinID:
UGS20237
LinkDB
All DBs
Position
2013308..2015923
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AA seq
871 aa
AA seq
DB search
MNLKNFTIKSQEALHQAQQIAQSFGHQQLENEHIFKGILEVDENVTPFILKKLNVNVDIF
KKVLDSTIQSFPKVTGSDLMFSRDAVSSLTEAEIIAKKMNDEYVSIEHLILAIFKSKSKV
AQILKDQSVTEKGLETAIAEIRKGERVTSASAEETYNSLNKYAKNLNDLARNGKLDPVIG
RDEEIRRVLQILTRRTKNNPMLIGEPGVGKTAIAEGLAHRIVDGDVPENLKDKIVYSLDM
GALIAGAKYKGEFEERLKAIVKEVTSAEGDIVLFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYFEKDKALERRFQKVMIDEPDTESAISILRGIKEKYETHHK
VRIKDDAIIAAVELSQRYITNRFLPDKAIDLMDEAASKLRMEINSKPEELDVLDRKIMQL
EIEIEAIKRENDETKLKSLGLDLANLKEERNEIFTKWKSEKDVVDNIQAVKLEIEDFKLE
AERAERDGDYGKVAEIRYGKIKEAQERLDALQTQLAENQAGNSLIKEEVTHDDIAEVVAK
WTGIPVTKMLQSEREKLLKLEDELHRRVVGQEEAIEAISDALRRSRAGLQDTKKPIGSFL
FLGTTGVGKTELAKALAEYLFDDENAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS
HIIQEKFDPEVSGLKGGIEAATEAAKTEVLGLLKQTVRPEFINRIDEIVMFTPLTDKNIN
EIVGLQLKSVIKMLAQQHITMDATPEAVAYLAEKGYDPQFGARPVKRVIQREVLNQLSKE
ILAGKVTTDSIILLDSFDNQLVFRNQNELVQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaaaattttactattaaatcgcaagaagctttgcatcaagcacagcaaatt
gcacaaagttttgggcaccaacagcttgaaaacgaacatatattcaaaggaattttagaa
gtcgatgagaacgtaactccttttattttgaaaaaattgaatgtcaatgtagatattttc
aaaaaagtattggatagtaccattcagagttttccaaaagttacaggtagcgatttaatg
ttctctcgtgatgcagtttcttcacttactgaagctgaaatcattgctaaaaaaatgaac
gatgaatacgtttctatcgaacatttgattttagccattttcaaatctaaaagtaaggta
gcccaaatattaaaagatcaaagtgtaaccgaaaaaggtttagaaacagctattgcggaa
attagaaaaggagaacgagtaacttcagcttctgcagaggaaacctataattcactaaac
aaatacgctaaaaatctaaatgatttagcaagaaatggaaaattagacccagttattggt
cgcgatgaggaaattcgtagagtgctacaaatcctaactcgtagaaccaaaaataatcca
atgttaattggagaaccaggcgttggtaaaacagctattgctgaaggtctagcacatcga
attgtagatggcgatgttcccgaaaatcttaaagataaaattgtttactccttagatatg
ggtgcactaattgcgggtgcgaaatataaaggggaatttgaagaacgtttgaaagccata
gtgaaagaagtaacttctgctgaaggtgatatcgtattattcatcgatgagattcacact
ttagtgggtgctggtggtggcgaaggcgcaatggatgctgccaatattttaaaaccagcc
ctagcacgaggcgaattacgtgcgattggtgcaaccactttagacgaatatcaaaagtat
ttcgaaaaagacaaagctttagaaagacgtttccaaaaggtaatgatagacgaacctgac
acagaaagtgcgatttcaattttacgtggtatcaaggaaaaatatgaaacacatcataaa
gtgcgtatcaaagacgatgcaattattgctgccgtggaactttcgcaacgttacattacg
aatcgtttcttaccagataaagctatcgacttgatggacgaagcggcttcaaaattgcgt
atggaaatcaattcaaaaccagaagaattagacgttttggatagaaaaataatgcaatta
gaaattgaaattgaggcaattaaacgtgagaatgacgaaaccaaattgaaatctcttgga
ttagatttagcgaacttaaaagaagaacgcaacgaaattttcaccaagtggaaatcagaa
aaagacgttgtagataatattcaagcagtaaaacttgagattgaagatttcaaattagaa
gcggaacgagcagaacgcgatggagattatggtaaagtagctgaaattcgttacggaaaa
attaaagaagcgcaagaacgattagatgctttacaaacacaattagcagaaaatcaagct
ggtaattctttaatcaaagaagaagttacgcatgatgatattgcagaagtggtagccaaa
tggacaggaattccagttactaaaatgcttcaaagtgagagagaaaaactactcaaatta
gaagatgaattacatcgaagagtagttggccaagaagaagcaattgaagcaataagtgat
gctcttagaagaagtcgcgcaggtttacaagatacaaaaaaacctattggttcgttttta
ttcttaggaacaactggtgttggtaaaactgaacttgcaaaagcattagccgaatatcta
ttcgatgatgaaaatgcgatgaccagaattgatatgagtgaatatcaagaacgtcatgcg
gtaagcagattggttggagcgcctccaggatatgttggttatgatgaaggcggacaatta
acggaagccgttcgaagaaagccatattcagtagtattgttagacgaaattgaaaaggca
catcctgatacatttaatatcttattacaagtattagatgaaggtcgattaaccgacaac
aaaggacgtgtagcggattttaaaaatacgattatcatcatgacttctaatatgggaagc
catatcattcaagagaaattcgatcccgaagtttcgggattaaaaggcggaattgaagca
gcaaccgaagcagcaaaaactgaagttttaggcttattgaaacaaaccgttagacctgag
tttatcaaccgtatcgatgaaattgtaatgttcactcctttgactgataaaaatatcaat
gaaatcgtaggcttacaattgaaaagtgtgattaaaatgttagcacaacaacacattacc
atggatgcaactccagaagcggtagcgtatttagcagaaaaaggatatgatcctcaattt
ggagcaagacctgtaaaacgtgttattcaacgtgaagtattgaatcaactttcaaaagaa
atattagctggaaaagtaactacagatagtattatattactagatagttttgataatcaa
ttagtgtttagaaatcaaaatgaattggttcaataa
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