Flavobacterium cupriresistens: LNP23_01835
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Entry
LNP23_01835 CDS
T10329
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fcg Flavobacterium cupriresistens
Pathway
fcg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LNP23_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcg03021
]
LNP23_01835
03400 DNA repair and recombination proteins [BR:
fcg03400
]
LNP23_01835
Enzymes [BR:
fcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LNP23_01835
Transcription machinery [BR:
fcg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LNP23_01835
DNA repair and recombination proteins [BR:
fcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LNP23_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UFH42970
LinkDB
All DBs
Position
complement(389999..390991)
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSALEGYAITSVRIE
GVDHEFSTISGVVEDVTEIILNLKQVRFKRQIEDIDNEAVTISVSGKDQLTAGDFQKFIS
GFQVLNPDLVICNLDSKIKLNFDLTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIKTDGSINPKDALTEAAKVLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVAVKNLTFGMDLAKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttatcatgatcgattcaaccgatttt
gaaggtaaattcgaatttagacctttagaacctggttatggattgactgttggtaatgca
cttagaagagttttgctttcagcattagaaggttatgcaattacatctgttcgtatcgaa
ggtgtagatcatgagttttctactatttcaggtgttgttgaggacgttactgaaattatc
cttaatctgaagcaagtacgtttcaaacgtcagattgaagatatcgataatgaagcagtt
acaatttctgtttctggtaaagatcaattaacagcaggtgattttcaaaaatttatttca
ggttttcaagttctgaacccagaccttgtaatctgtaatttagattcaaagatcaaattg
aacttcgatttaacaatcgaaaaaggtagaggatatgttcctgctgaggagaacaaaaaa
cagaatgcagcaattggtactatttttacagattctatttttactccggtaaaaaacgta
aaatatgctattgaaaacttccgtgtggaacaaaaaacagattacgaaaaattagttttt
gaaattaaaactgatggttctattaatccaaaagatgcccttactgaagctgctaaagtt
ttaattcaccacttcatgttattttctgacgaaagaattacactcgaggctgacgaaatt
gcacaaacagaatcgtatgatgaagagtcattgcatatgagacaattgcttaaaactaag
cttgttgatatggatttatctgtgagagcattaaattgcttgaaagcggctgaagttgat
acacttggtgatttagtatcgttcaataaaaatgacctaatgaaattccgtaattttggt
aaaaaatctttaactgaacttgatgaacttgttgcagttaaaaatctaaccttcggaatg
gatttagctaaatacaaattagataaagaataa
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