Falco cherrug (Saker falcon): 102051132
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Entry
102051132 CDS
T02911
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
fch
Falco cherrug (Saker falcon)
Pathway
fch03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fch00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102051132 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fch03019
]
102051132 (TARDBP)
Messenger RNA biogenesis [BR:
fch03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102051132 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
Motif
Other DBs
NCBI-GeneID:
102051132
NCBI-ProteinID:
XP_005437134
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTAEELQQFFAQYGEVLDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQ
REQNQGFSSGNNSYGGSNSGAAIGWGSASNTGSSSGFNGGFGSSMDSKSSGWGM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtatatccgggtgacggaggacgagaacgatgagcccatcgagatcccctcg
gaggacgacggcaccgtgctgctgtccacagtgaccgcccagttccccggggcgtgtggg
ctgcgctacaggaacccggtgtcgcagtgcatgcggggggtccggctggtggagggcatt
ctgcacgcgccagaagccggatggggcaacctggtctatgttgttaattatcccaaagat
aataagagaaaaatggatgaaacagatgcatcatcagctgtgaaagtgaaacgagcagta
cagaagacttcggatttaatagtcttgggtcttccctggaaaaccactgaacaagactta
aaggaatatttcagtacgtttggagaagttctgatggtgcaggttaagaaggatattaaa
actggccactcaaaaggttttggttttgttcggtttacggattatgaaacccaggtgaaa
gtaatgtctcagcggcacatgatagatggaagatggtgtgactgtaaacttcccaattct
aagcaaagtcctgacgaacctttgcgcagcagaaaagtgtttgttgggcgctgcaccgag
gacatgacggcagaggaactccaacagttctttgcccagtacggagaagtgttagatgtc
ttcattcctaaacccttccgagcttttgcttttgttacatttgcagatgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcataatagcaatagacagttagagagaggtggaagatttggtggtaatccg
ggaggctttgggaatcagggggggtttggcaacagcagaggaggtgggggaggactgggt
aacaaccagggcagtaacatgggcggagggatgaacttcggagccttcagcatcaaccct
gccatgatggcggcagcacaggcagcgctgcagagcagctggggaatgatgggcatgttg
gctagtcagcagaaccagtctgggccgtcgggaaacaaccagccccaaggcaacatgcag
cgggagcagaaccagggctttagttcaggaaataactcgtacggtggctccaactcgggg
gcagcgataggctggggttcggcctcgaacacgggctccagcagtgggtttaatggaggc
tttggttcaagcatggattccaagtcgtcaggctggggaatgtag
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