Fusobacterium canifelinum: I6I83_08900
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Entry
I6I83_08900 CDS
T07213
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fci
Fusobacterium canifelinum
Pathway
fci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I83_08900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fci03019
]
I6I83_08900 (recQ)
03400 DNA repair and recombination proteins [BR:
fci03400
]
I6I83_08900 (recQ)
Enzymes [BR:
fci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I83_08900 (recQ)
Messenger RNA biogenesis [BR:
fci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I83_08900 (recQ)
DNA repair and recombination proteins [BR:
fci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I83_08900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQS87159
LinkDB
All DBs
Position
complement(1823631..1825451)
Genome browser
AA seq
606 aa
AA seq
DB search
MKSEALKILKEYYGYDNFREGQEKIIDAILEKRNVLGIMTTGAGKSICYQIPALIFEGLT
IIISPLISLMKDQVDSLRLIGIEASYLNSSLDNDEYNKILFKIKRGKIKLLYISPERLEN
KFFLNFIKTVKISMVVVDEAHCVSQWGENFRRSYLRIADFVKYITGKSQIQTLAFTATAT
PKIKVDIIEKLNIANPFIYVDYFNRDNIYFKVIDNSGLDKDLDIDSKAFIIDYLRKHKGK
SGIIYCSTRKNVDDIYSYLVSFDRSVTKYHGGMSKEERDKNQKLFLDDDVEIMVATNAFG
MGINKSNIRYVIHANIPADLESYYQEAGRAGRDGGPAEAILVYNEKDRDIQRYLMEKEAE
GKKDKNYLNKRLKNFTKMLEYVELKTCYREYILKYFGEKMIRNYCGYCENCKKEKNIKDF
SLEAKKIISGVGRAKESLGISTLANMLMGKADTKMLNKGLDKISTFGIMREDSQEWIESF
INYMISEKYLVQSAGSFPVLKLGEKYKDILNGNIKIIRKKDEKIDFDYYENDLFKELNFL
RKEISKQENIAPYIIFSDMTLIEMAEKKPRNRWDMLKIKGIGNQKFKSYGEKFLERIINY
CMEERI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcagaagcactcaaaattttaaaagaatattatggttatgataattttagagaa
ggacaagaaaaaataatagatgccatcttagagaaaagaaatgttttagggattatgacg
acaggagctggaaaatccatctgttatcaaatacctgcactaatctttgaggggctaact
ataataatttctcctctaatatctctaatgaaagaccaagtagatagcctaagattaatt
ggaatagaagcaagttatttaaactcaagtttagataatgatgaatataataagatactt
tttaaaataaaaagaggaaagataaaattattgtatatctcacctgaaagattagaaaat
aaatttttcttaaactttataaaaactgtaaaaatttctatggtagtagtagatgaagca
cattgtgtatcccagtggggagaaaattttagaagaagttatctaagaatagcagatttt
gtgaaatatataacgggaaaaagccaaattcaaactttggcttttactgctactgcaacc
cctaaaattaaagtagatataatagaaaaattaaatatagctaatccttttatctatgta
gattactttaatagagataatatatattttaaagttatagataatagtggacttgataaa
gacttggatatagattctaaagcttttataatagattatctaagaaaacataaaggaaaa
tcaggaataatttattgctcaaccagaaaaaatgtagatgatatatatagttatcttgtg
agttttgatagaagtgttacaaaataccatggtggaatgtctaaagaagaaagagataaa
aatcaaaaattattcttggatgatgatgttgaaataatggtagcaactaatgcttttggt
atgggtataaataagtctaacataagatatgtaatacatgcaaatattccagctgactta
gaaagctattatcaagaagcaggtagagcaggaagagatggtggacctgctgaagctatt
cttgtatataatgaaaaagatagggatattcaaagatatttgatggagaaagaagcagag
ggaaaaaaagataaaaattatcttaataaaagattaaaaaattttactaaaatgttagaa
tatgttgaattgaaaacctgttacagagaatatattttaaagtattttggtgaaaaaatg
ataagaaattattgcggttattgtgagaactgcaaaaaagagaagaatatcaaagatttt
tcactggaagcaaagaaaattatttcaggtgtaggtagggcaaaagaaagtttgggaata
tctacattagctaatatgcttatgggaaaagctgatactaaaatgttaaataaaggactt
gacaaaatttctacatttgggataatgagagaagatagtcaagagtggatagaaagtttt
ataaattatatgatttctgaaaaatatttagtgcagagtgcaggaagttttccagttcta
aaacttggtgagaagtataaagatattttaaatggaaatataaaaataataagaaagaaa
gatgagaaaattgactttgattattatgaaaatgatttatttaaagaattaaattttctt
agaaaggagatttcaaaacaagaaaatattgcaccttatattattttttctgatatgact
cttatagagatggcagagaaaaaaccaaggaataggtgggatatgttaaaaataaaaggt
attggcaatcaaaaatttaaaagttatggggaaaagtttttagaaagaattattaactat
tgtatggaggagagaatatga
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