Flavobacterium columnare: FCOL_00870
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Entry
FCOL_00870 CDS
T01653
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
fco
Flavobacterium columnare
Pathway
fco00540
Lipopolysaccharide biosynthesis
fco01100
Metabolic pathways
fco01250
Biosynthesis of nucleotide sugars
Module
fco_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FCOL_00870
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fco01005
]
FCOL_00870
Enzymes [BR:
fco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
FCOL_00870
Lipopolysaccharide biosynthesis proteins [BR:
fco01005
]
Lipid A
FCOL_00870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
NeuB
Motif
Other DBs
NCBI-ProteinID:
AEW85023
UniProt:
G8X886
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All DBs
Position
complement(209490..210308)
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AA seq
272 aa
AA seq
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MNLENIPNIKHLDSNNFFVLSGPCAIEGEEMAMKIAERLVKITDDLKIPYVFKGSFKKAN
RSRVDSFTGIGDEKALKILQKVSKEFNVPTITDIHTNEDAAMAAEFVDILQIPAFLVRQT
DLVVAAAQTQKTVNLKKGQFMSPESMKHAVQKVLDSNNENVMVTDRGTMFGYQDMIVDFR
GIPTMRQMATTVLDITHSLQQPNQLVGVTGGRPDMIETIAKAGIAVGVDGIFIETHFDPA
HAKSDGANMLHLDYFENLMKKLVAIRQTVNQF
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagaaaatattcctaatatcaaacatttagatagcaacaatttttttgttctt
tctggaccttgtgccatagaaggtgaagaaatggccatgaaaatagccgaacgtttagta
aaaattacagatgatctaaaaattccttatgtatttaaaggttcatttaaaaaagccaat
cgctctcgcgtagacagttttacaggtattggagatgaaaaagcccttaaaattttacaa
aaagtaagtaaggagttcaatgttcctaccattactgatattcatacgaacgaagatgct
gcaatggcagccgaatttgttgatatcttacaaatacctgctttcttagttcgccaaaca
gatttagttgtagctgctgcacaaacccaaaaaacagttaatttaaaaaaaggacaattc
atgagtcctgaaagcatgaaacatgctgttcaaaaagtattagactctaataatgaaaac
gtaatggttacagatagaggaactatgtttggatatcaagacatgattgttgatttcaga
gggattcctactatgcgtcaaatggctactaccgtattagatataactcattccttacaa
caacctaatcaattagtaggcgtaacaggtggtagacctgatatgattgaaaccattgca
aaggcaggaatagctgtaggtgttgatggtatatttatagaaacacattttgatcctgct
catgctaaaagtgatggagctaatatgttacatttggattattttgaaaatctaatgaaa
aaattagttgcaattagacaaacagttaatcaattttaa
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