KEGG   Flavobacterium crocinum: HYN56_01240
Entry
HYN56_01240       CDS       T06596                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fcr  Flavobacterium crocinum
Pathway
fcr02024  Quorum sensing
fcr03060  Protein export
fcr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HYN56_01240
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HYN56_01240
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYN56_01240
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fcr02044]
    HYN56_01240
Enzymes [BR:fcr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HYN56_01240
Secretion system [BR:fcr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HYN56_01240
  Eukaryotic Sec-SRP protein
   HYN56_01240
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 cobW AAA_33 AAA_17 nSTAND3 CbiA CLP1_P AAA_24 DUF5693 6PF2K AAA_31 APS_kinase TsaE AAA_18 NACHT ATP_bind_1 ATPase KAP_NTPase KTI12 DO-GTPase1 NPHP3_N AAA_16 GET2
Other DBs
NCBI-ProteinID: AWK02910
UniProt: A0A2S1YFV3
LinkDB
Position
complement(252684..254036)
AA seq 450 aa
MFDNLSDKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTARVKDKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGVNLSGNPTVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDQEMMDEIARVHKAIQPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAALSIKSIVNKPIKFVGTGEKMEAIDVFYPERMAERILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIYSMTPAERSKPAIIDVKRKARIAKGSGTKVEQVNQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPR
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagtgataagttagataaagcgttccatatattaaaagggcacggt
aaaattacagaagtaaacgttgccgataccttaaaagaagttcgtcgtgccttacttgat
gccgacgttaactttaaaattgctaaagattttacggcaagagtaaaagacaaagcaatt
ggacaggacgtattgacaaccttacagccgggacaattattagtaaaactggtaaaagat
gagttgacagaattaatgggtggagatgtagctggtgtaaacttatcaggaaatccaact
gtaattttgatgtcaggacttcagggttctggtaaaactactttctcagggaaattagca
aatttcttaaaaacaaagaaaaacaagaaaccacttcttgtagcttgtgatatctaccgt
ccggcggcgattaatcagttgcatgttgtgggagatcaaataggtgttgaggtttactca
gaaccggaaaacaaaaatcctgtagaaattgctcaaaatgcaatcaaacatgctaaagca
aacggattcaatgttgtaattgtcgatacagcaggtcgtttggcagtagatcaggaaatg
atggacgaaattgctcgtgtacacaaagcgattcagccacaagaaacattgttcgttgtt
gattctatgacaggacaagatgctgtaaacacagcaaaagcgttcaacgatatcttgaat
tttgatggggttatcttaacgaaattagatggtgatactcgtggtggagcggcactttca
atcaaatcgattgtaaacaaaccaatcaaatttgttggtactggagaaaaaatggaagca
attgatgttttctatccggaacgtatggcagagcgtatcttaggaatgggagacgttgtg
tctcttgttgaaagagctcaggaacaatttgatgaagaagaagcaagaaaacttcaaaag
aaaattgcgaaaaacgagtttggttttgatgacttcttaacgcagattcagcaagtaaag
aaaatgggtaatatgaaagacttggttggaatgataccaggagcttcaaaagccatgaaa
gatgttgaaatcgaagatgacgccttcaaacatatagaagcgattatttattcaatgacg
ccggctgaaagaagcaagccagccattatcgacgtaaaaagaaaagccagaatcgcaaaa
ggttcgggaactaaagtcgagcaggtaaatcagctgatgaaacagtttgaccaaatgagc
aagatgatgaagatgatgcaaggcccaggcggaaaaaacctaatgaaaatgatgggaggc
atgaaaggaatgccaggaggaatgccgagataa

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