Fragilariopsis cylindrus: FRACYDRAFT_183412
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Entry
FRACYDRAFT_183412 CDS
T04784
Symbol
LCYB2
Name
(GenBank) lycopene beta cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
Brite
Enzymes [BR:
fcy01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
FRACYDRAFT_183412 (LCYB2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lycopene_cycl
Thi4
FAD_binding_3
Pyr_redox_2
NAD_binding_8
Shikimate_DH
DAO
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
OEU19212
JGI:
183412
UniProt:
A0A1E7FM14
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MRILVIITCTFTSLFCCFSHAFLATSPPLLVGPISSTSTSSTRYYPFCSKNFPAIGTSSL
KSSSNAADNNNNIDDSCDVLILGGGPAGCAIASLLGSNGKLDVVVANKDFDKDWVPNYGV
WKDEWQTVLDEYKSFGIELDGGEFGRSVDREWDVTDCYFGGSFDIPTEKRMRLDRPYCRV
DRFALKKSLTKNFRVVEANHMSNAIGINVYSPAGTLIHDEDGTTIQLQPKDADSSPITMR
TKIVIDTTGHETKLVMKDNIEPYTQPGFQIAYGASVVVDETESTNLSKIGPYEKDAMTLF
DYRTDHFDGNESETIKANKAPTFMYAMPLGGNRVFFEETSLVARPAVSFQECKDRCFKRL
KHHGIVVTKIEEEEFCYIPMGGALPARDQRILGLGGAATMVHPSTGYHICRCLMGASSVA
KVIQEELALEQPNIDRAVASSYDALWSPGNIRQRNFATFGGEFLMKQNVVGLRGFFDGFF
KLPLELWGGFLAGWPGLAYNENHESWEKRIWFGLNFIVKLPLPVAADMFLSIVSYSLTEN
FSLIQSVTPLLGDPPSYKYKRNMDSIGDVAAKEEAVGMIRQSNADVAEMPTEVAITAEKT
KDVEIVEST
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccttgtcatcatcacttgcacatttactagcctgttctgttgtttcagccat
gctttcctcgcgacatcgcccccactactagtaggaccgatctctagcacttccacttcc
agcacgcgttattatcctttctgtagtaagaattttcccgctatcggtacatcatcatta
aaaagtagttctaatgctgctgataataataataatattgatgattcttgtgatgtgctt
atattaggtggtggtccagctggatgcgcaatcgcatcacttttgggttcgaatggaaaa
ttggatgtagttgttgccaataaagattttgataaagattgggttccgaattatggtgta
tggaaagatgaatggcaaacagtattagatgaatacaaatcattcggaatagaattagat
ggtggggagtttggccggtccgttgatagagaatgggacgtcacggattgttactttggt
ggatcttttgatataccgactgaaaaacgtatgagacttgatcgaccgtattgtcgtgtt
gaccggtttgcattaaagaaatcattgacgaagaactttcgtgttgttgaggctaatcat
atgtccaatgctattggcattaatgtatatagtcccgctggaaccttgatccatgatgag
gatggaactactatacagttacaaccaaaagatgcagattcatccccaataacaatgaga
acaaagattgttattgacacaactggtcatgagactaagttggttatgaaagataatata
gaaccatatacacaacctggatttcaaattgcatatggtgcatcggttgtagttgatgaa
acagaatcgacaaacctatcaaagatcggaccgtacgaaaaagacgcgatgacattattt
gattatagaacagaccattttgacgggaatgaatcagaaacaataaaagcaaacaaggca
cctacatttatgtatgcgatgcctcttggaggaaatagagtattttttgaagagacatcg
ctggtagctcgaccggctgtatcttttcaagaatgtaaggaccgatgtttcaaacgattg
aagcatcatggtattgttgttacgaagattgaagaagaggaattctgttatataccgatg
ggtggtgccctcccagctagagaccaacggattctaggactgggtggtgcagcaacaatg
gtccatccaagtacggggtatcatatctgtcgttgtctcatgggtgctagttcggttgcg
aaggtcattcaagaagaacttgctttggaacaaccaaacatcgatcgagctgtcgcatcg
tcctacgatgcattatggtcacctggaaacataagacaacggaattttgctacattcggt
ggtgaattcctgatgaaacaaaatgttgtaggtcttcgaggtttctttgatgggttcttt
aaacttccattagagctttggggtgggtttcttgccggatggcctggtcttgcctacaac
gagaatcacgaatcatgggagaaacggatatggttcggtctcaattttattgtaaaacta
ccactcccagttgctgcagatatgtttcttagtatcgtttcttactctcttactgagaac
ttctcgctaattcaatctgtaactcctttgcttggtgatccaccttcctacaaatataag
cgaaatatggattccataggggatgttgctgcaaaagaagaagctgttggcatgattcgt
caatcaaatgccgacgtagctgaaatgcctaccgaagttgccattaccgcagagaagact
aaagatgtagaaatagtcgaaagtacctaa
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