Fragilariopsis cylindrus: FRACYDRAFT_224043
Help
Entry
FRACYDRAFT_224043 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FRACYDRAFT_224043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_224043
Spliceosome [BR:
fcy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
FRACYDRAFT_224043
Complex C
U4/U6.U5 tri-SnRNP related factors
FRACYDRAFT_224043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
OEU20693
JGI:
224043
UniProt:
A0A1E7FS84
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MSRSALWRQEGAKNLREKEAEDLFHMAVEEGRNNPMKGLLPLWGPDDSFHFNPMLLQKII
KSSYFQKCCRDITDWNTLVDEVYYQAKHLEPLAVGGEPSNAFCLLLRLLTLRCSEKQMRL
LLDHVDSPYIRGIGFLYLRFAGEPKTIWKWIDPYLYDDEPITVTATVNKNKTQRNRQQQN
ETTIGDFVRRLFSSERDYYGTMLPRIPIQVERELQVKLLFAERIQDRVKKHISNRKTMDY
FQTLGSRVMALYGDDENPIQWYEAVVDRVVTRNEETSRQLETPKFTVTFTEYGNTETVSL
GEMEMRGVALDSVKKDLPVSRGSGNHQSSQQKTAQPRDRGHDRAGPSDYDRRGYTNSDSS
DRRYYERGDNESRRGYAASRCDDTNSRSATALPSDDDLYEEVRRRERANVTARGNQPVTR
RPNKRTVQGSSINPHPPPARAPTYQERTPSHSTPAPASLDSSSNSAPKKRSAEEIAAVQD
KKRKLMAKYG
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatctgcgttatggcgccaagagggtgcgaagaatttgcgagagaaagaggcg
gaagatctcttccatatggcggtggaagaagggaggaacaatccaatgaagggtttgtta
ccactctggggtcccgacgactctttccattttaatccaatgctattgcaaaaaataatc
aaatcgtcctactttcaaaaatgctgcagagatatcacagactggaacaccttggtcgat
gaagtttactaccaagccaagcatttggagccgttagctgttgggggcgaaccatccaat
gccttttgcttgctactgcgtctcctgacgttgcgatgttccgaaaaacaaatgagatta
ttactagaccatgtagatagtccttatattcgaggaatcggttttttatatctgcgattc
gcgggtgaaccgaaaacaatttggaaatggattgatccatatttgtatgacgacgagcct
atcacagtaaccgcaacagtcaacaagaacaagacacaacgtaaccgtcaacaacaaaac
gaaactacaatcggtgattttgtcaggcgacttttctcgtcggaacgtgattattatgga
accatgttaccaagaataccgatacaagtggaaagggagcttcaggtcaagttgcttttt
gcagaacgaattcaagatcgagtaaagaagcatatttcaaatcgaaagacaatggattac
tttcaaactctgggttctcgcgttatggcgttgtatggcgatgatgagaacccgatacaa
tggtacgaggctgtagttgatcgggttgttactcgcaatgaagagacatctcgacaactc
gaaacaccaaaatttactgtgacgtttacagaatacggaaatacagaaacggtatcatta
ggggaaatggaaatgcggggtgttgctcttgattctgtcaaaaaagacttgcccgtgtct
cggggtagtggaaatcatcaaagtagtcaacaaaagactgctcaaccaagagatagagga
catgacagagctgggccgtcggattatgatcgcaggggatatacgaatagtgatagcagc
gataggaggtattacgaaagaggagataatgaatctcgtagaggatatgctgcatcaaga
tgcgatgatacgaactcacgcagtgctacagcattgcctagtgatgacgatctgtacgaa
gaggtacgaagacgagaacgagccaatgtaacagcccgaggaaatcaacccgttacccgt
agacctaataagagaactgttcagggatcatctatcaatccgcatcctccgccagcccgt
gcacctacgtaccaagaaagaacaccttctcactccacgcctgcgccagcatcgcttgat
tcgtcatcaaactcagcaccaaagaagagatccgcagaggagattgctgcagttcaagat
aaaaagcgaaaattgatggcaaagtacggatga
DBGET
integrated database retrieval system
