Flavobacterium dauae: NU10_09210
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Entry
NU10_09210 CDS
T09251
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fda
Flavobacterium dauae
Pathway
fda02024
Quorum sensing
fda03060
Protein export
fda03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NU10_09210 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NU10_09210 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NU10_09210 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fda02044
]
NU10_09210 (ffh)
Enzymes [BR:
fda01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NU10_09210 (ffh)
Secretion system [BR:
fda02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NU10_09210 (ffh)
Eukaryotic Sec-SRP protein
NU10_09210 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
nSTAND3
AAA_33
cobW
6PF2K
CLP1_P
AAA_24
APS_kinase
CbiA
AAA_31
TsaE
AAA_17
AAA_18
ATP_bind_1
NACHT
DO-GTPase1
DUF5693
KTI12
MMR_HSR1
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WLD22897
LinkDB
All DBs
Position
complement(1889469..1890812)
Genome browser
AA seq
447 aa
AA seq
DB search
MFDNLSDKLDKAFHILKGHGKITEVNVAETLKEVRRALLDADVNFKIAKDFTNRVKEKAI
GQDVLTTLQPGQLMVKIVKDELTELMGGDAAGVNLSGNPTVILMSGLQGSGKTTFSGKLA
NFLKTKKTKKPLLVACDIYRPAAINQLHVVGDQIGVEVYSEPENKNAVSIATNAIEHAKK
NGFNVVIVDTAGRLAIDEEMMNEIANVHAAIKPHETLFVVDSMTGQDAVNTAKAFNERLN
FDGVVLTKLDGDTRGGAAISIKSIVNKPIKFIGTGEKMDAIDVFYPDRMADRILGMGDVI
SLVERAQEQYDEEEARKIQKKIAKNEFGFDDFLSQIQQVKKMGSMKDLMGMIPGVGKALK
DVEIEDDAFKHIEAIIHSMTPVERKRPSLLDAKRKQRIAKGSGTDIQQVNQLLKQFDQMS
KMMKMMQGAQGKNLMRMMGQMKGMGMK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataatttaagcgataaattagacaaagcctttcatatattaaaaggtcacgga
aaaattacagaagttaatgttgccgaaaccttaaaagaagtacgtcgtgccttattagat
gccgatgttaactttaaaattgccaaagattttaccaaccgcgtaaaagaaaaagcaatt
ggtcaagacgttttaacaacgttgcaaccaggtcagttaatggttaaaatcgttaaagac
gaattaaccgaattaatgggtggcgatgcagcaggagtaaatctttcgggaaatcctact
gtaattttaatgtcgggtttacaaggttcgggtaaaactactttttccggaaaattagcg
aattttttaaaaactaaaaaaacaaagaaaccgttattggttgcctgtgatatttaccgt
ccggctgcaattaatcagttgcacgttgttggggatcagatcggtgttgaggtttactct
gaacccgaaaacaaaaacgcggtttctattgcaacaaacgcgattgaacacgccaagaaa
aacggattcaacgttgtaattgtagatacagccggtcgtttagcgattgatgaagaaatg
atgaacgaaattgcaaacgttcacgctgccattaaaccacacgaaaccttgtttgttgta
gattctatgactgggcaagatgctgtaaatacggcaaaagcgttcaatgaacgattgaat
tttgacggagttgttcttacaaaattagatggtgatacgcgtggtggagctgcgatttct
attaaatctatcgtaaacaagccaattaaatttattggtacgggcgagaaaatggacgct
attgacgtgttctatcccgatcgtatggcagaccgtattttgggaatgggtgacgttatt
tcgttagtagagcgtgcacaagaacaatacgatgaagaagaagcccgaaaaattcaaaag
aaaattgccaaaaacgaatttggttttgacgatttcttaagccaaattcaacaggtaaag
aaaatgggatcgatgaaagatttaatgggaatgattccaggtgttggtaaagcgttaaaa
gatgttgaaattgaagacgatgcctttaaacatatcgaagcaattattcattcaatgact
ccggttgaacgcaaaagaccgtctttgttagacgcaaaacgcaaacaacgtatcgcaaaa
ggttcgggaaccgatattcagcaggtaaaccaattgttgaaacagttcgatcaaatgagt
aaaatgatgaagatgatgcaaggtgcacaaggtaaaaacctaatgcgtatgatggggcag
atgaaaggtatgggaatgaagtaa
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