Flavobacterium davisii: JJC05_05785
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Entry
JJC05_05785 CDS
T10287
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
fdv Flavobacterium davisii
Pathway
fdv00300
Lysine biosynthesis
fdv00550
Peptidoglycan biosynthesis
fdv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fdv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JJC05_05785
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JJC05_05785
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fdv01011
]
JJC05_05785
Enzymes [BR:
fdv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JJC05_05785
Peptidoglycan biosynthesis and degradation proteins [BR:
fdv01011
]
Precursor biosynthesis
Amino acid ligase
JJC05_05785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
MobB
CbiA
DUF3440
AAA_30
SRP54
Motif
Other DBs
NCBI-ProteinID:
QYS89732
LinkDB
All DBs
Position
complement(1174587..1176047)
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AA seq
486 aa
AA seq
DB search
MNLKDLLYKVTIETVLGSTSITVNQIQFDSRKIGTDDVFVAIRGTLSDGHQYIDKAISLG
ASVIICEELPQTCLQNITYVKVIDTNSALAQLANNYYGTPSHKLTLVGVTGTNGKTTIAS
LLYQMFKKAGYKVGLLSTVKIMVDTIEYKATHTTPDSLTINYFLNEMIQEGCEYCFMEVS
SHGVHQKRTEGLLFAGGVFTNLSHDHLDYHPTFAEYRDVKKTFFDHLPKTAFALTNIDDK
NGTVMLQNTQARKKTYALKTYADYKAVILENQLSGLQLKVNEHDVWTRLIGTFNAYNLLA
IYGVAVELGIDKIEALRLLSELESVSGRFQFIVSKEKITAIVDYAHTPDALENVLNTIND
IRTKNEQLITIVGCGGDRDRTKRPIMARIATEMSSKAILTSDNPRTESPEVIIEEMEAGI
SAENFKKYLAIKDRKQAIKTACQMAEKGDIILIAGKGHETYQEINGIRHDFDDMKIVKEL
LEQLNK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaaagatttattatacaaagtaactatagagacagttttgggatctacttcc
ataactgtaaatcaaattcagttcgattctcgtaaaatcggaacagatgatgtttttgta
gcaatacgaggaacattgtctgatgggcatcagtatattgacaaagcaattagtttagga
gctagtgtaataatttgtgaagaattgcctcaaacttgtttgcaaaatataacctatgta
aaagtaatagatacaaatagtgctttagcccaattagcaaataattattatggaacacca
tcacataagttaactttagttggcgttacaggcacaaatggtaaaaccacaatagcatcc
ctcttatatcaaatgtttaaaaaagcaggatataaagtaggattgctatcaaccgttaaa
attatggttgatacaatagaatataaagcaacccatacaacacccgattcattaactatt
aattattttttaaatgaaatgatccaagaaggatgtgaatattgctttatggaagtaagt
tctcatggagtacatcaaaaacgaaccgaaggtttactttttgcaggaggtgtttttacc
aatttgtcccatgatcacctagattatcatcctacatttgcggaataccgagacgttaaa
aaaacctttttcgaccatttacccaaaactgcttttgcattaactaatattgatgacaaa
aacggaactgtaatgttacaaaatacacaagcaaggaaaaaaacctatgctttaaaaacc
tatgcagattataaggccgttatattagaaaatcaattgtctggacttcaattaaaagtt
aatgaacacgatgtttggactcgcttgataggtacttttaatgcttacaacttacttgct
atctatggcgtagccgtagagctcggaatagataaaatagaagccttacggttattatcc
gaattagaaagcgtttctggtagatttcagtttattgtttccaaagaaaaaattacagcc
atagtagattatgcacatacaccagatgctctagaaaacgtattgaataccattaatgat
attcgtacaaaaaatgaacaactaattactattgtaggttgtggaggtgatagagataga
acaaaacgtcctatcatggcacgaattgccacagaaatgagttcaaaagcaattttaact
tccgataaccctcgtaccgaaagtcccgaggttattatagaagaaatggaagctggaatt
agtgcagaaaattttaaaaaatatttagccataaaagatcgtaaacaagctataaaaaca
gcttgtcaaatggctgaaaaaggcgatataattttaatagccggcaaaggacatgaaaca
tatcaagaaatcaatggaatacgtcatgattttgatgatatgaaaatagtaaaagaatta
ttagaacaattaaataaataa
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