Frateuria edaphi: LQ772_05230
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Entry
LQ772_05230 CDS
T08888
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
fed
Frateuria edaphi
Pathway
fed02024
Quorum sensing
fed03060
Protein export
fed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LQ772_05230 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ772_05230 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ772_05230 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fed02044
]
LQ772_05230 (ffh)
Enzymes [BR:
fed01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LQ772_05230 (ffh)
Secretion system [BR:
fed02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LQ772_05230 (ffh)
Eukaryotic Sec-SRP protein
LQ772_05230 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_16
AAA_33
AAA_14
KTI12
APS_kinase
T2SSE
AAA_30
AAA_31
SLFN-g3_helicase
DnaB_C
AAA_26
NAT10_TcmA_helicase
nSTAND_NTPase5
TsaE
Fer4_NifH
NACHT
YqeC
6PF2K
Thymidylate_kin
ParA
AAA_25
KAP_NTPase
ResIII
ATPase
ATP_bind_1
nSTAND3
AAA_24
AAA_5
AAA_19
Sigma54_activat
ArsA_ATPase
CGDB
Rad17
Motif
Other DBs
NCBI-ProteinID:
UGB46701
LinkDB
All DBs
Position
1131195..1132577
Genome browser
AA seq
460 aa
AA seq
DB search
MFESLSQRLSTTVNRLRGRGRLTEENIRESLREVRIALLEADVALPVVQALIERVKVRAV
GQEVLKSLSPGQALVKVVSDELTKLMGTANAELSLAQQPPAVVLMAGLQGAGKTTTVAKL
ARFLTERKKKKVMVVSCDVYRPAAIEQLRTLAEQVGVKFFPSEAGQNPVDIAKAAIAAAR
REVVDVLLVDTAGRLHIDEAMMGEIKALHAAITPVETLFVVDSMTGQDAATTAKAFSEAL
PLTGVVLTKTDGDARGGAALSVRYITGRPIKFLGAGEKTDALEPFHPDRVAQRILGMGDV
LSLVEEVERKVDQEKAQQLAQKVMKGKRFDLNDMRDQLEQMNNMGGLAGLMDKLPGVANL
PDNVKSKVNDNEIKRMVAIIGSMTKKERRHPDLLNGSRRARVARGSGTQPADVNRLLKQY
MQMEKMMSKLSKGGTKGLLRQMRGAMKGMGGMGGGFPPMR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtcgctgagccaacgcctctccacgaccgtcaaccgcctgcgcggtcgcggt
cggctgaccgaggaaaacatccgcgagtccctgcgcgaggtgcgcatcgcgctgctggag
gcggacgtcgcgctgccggtggtgcaggcgctgatcgagcgggtgaaggtgcgcgcggtc
ggccaggaagtgctcaagagcctgtcgccgggccaggcgctggtaaaggtggtcagcgac
gagctgaccaagctgatgggcacggccaacgccgaactcagccttgcacagcagccgccc
gcggtagtgctgatggccggcctgcagggcgcgggcaagaccaccacggtggccaagctc
gcccgcttcctcaccgaacgcaagaaaaagaaggtgatggtggtcagctgcgacgtctat
cgtccggccgccatcgagcagctgcgcacgctggccgagcaggtcggcgtgaagttcttc
ccgtccgaggcgggacagaacccggtcgacatcgccaaggccgcgatcgccgcggcccgc
cgcgaggtagtcgacgtgctgctggtcgacactgccggccgcctgcacatcgacgaagcg
atgatgggcgagatcaaggcgctgcatgctgcgatcacgccggtcgaaacgctgttcgtg
gtcgattcgatgaccggccaggacgcggccaccactgcgaaagcgttcagcgaggcgctg
ccgctgaccggcgtggtgctgaccaagaccgacggcgacgcccgtggcggcgccgcgctg
tcggtgcgctacatcaccggacgtccgatcaagttcctgggcgctggcgagaagaccgat
gcgctggagcccttccaccccgatcgcgtggcgcagcgcatcctcggcatgggcgacgtg
ctttcgctggtcgaggaagtcgagcgcaaggtcgaccaggagaaggcgcagcagctcgcc
cagaaggtgatgaagggcaagcgcttcgacctcaacgacatgcgcgaccagctcgagcag
atgaacaacatgggcggcttggccggcctgatggacaagctaccgggcgtggccaacctg
ccggacaacgtgaagtcgaaggtcaacgacaacgagatcaagcgcatggtcgcgatcatc
ggttcgatgaccaagaaggaacgtcgccaccccgacctgctcaacggttcgcgccgtgcc
cgcgtggcgcgcggttcgggcacccagccggccgacgtcaaccgcctgctcaagcagtac
atgcagatggaaaagatgatgtccaagctctccaagggcggcaccaagggcctgctgcgg
cagatgcgcggggccatgaagggcatgggcgggatgggcggcggctttccgccgatgcgc
tga
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