Frateuria edaphi: LQ772_08370
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Entry
LQ772_08370 CDS
T08888
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
fed
Frateuria edaphi
Pathway
fed01501
beta-Lactam resistance
fed01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
fed00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ772_08370
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ772_08370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fed02000
]
LQ772_08370
01504 Antimicrobial resistance genes [BR:
fed01504
]
LQ772_08370
Transporters [BR:
fed02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LQ772_08370
Antimicrobial resistance genes [BR:
fed01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQ772_08370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UGB47281
LinkDB
All DBs
Position
complement(1761514..1764744)
Genome browser
AA seq
1076 aa
AA seq
DB search
MSEPKLGFSGRIARAFQASPLTPILALAALLLGLAAAAITPREEEPQIDVTMANVMVPFP
GADVRDVENLVAFPLEQKLSEIEGVKHVYSVSQPGVAVLTVEFQVGVPRQSAIVRLYNQV
FQNQDFVPPGLGVGPPLIRPMGIDDVPVMAITLWSDAPAQNPTRLAEVAHTLETDLKRVS
GTRDVYTLGAPTRAVVVELDAARLAAYGMAVGDLAGALKAANVVAQAGDRVAGDRDVPVT
AGTFLASAGDVAHLVIGLKHGQPVFLSDVARIHAGADLPSRYVWFGAPAGNGGPAGNAPA
VTLAVAKKPGANAADITTAIAARLAALRNVTIPADVHVTVTRDYGQTATDKADKLIHKLI
FATGSVVLLVLFALGWREAIVVGSAVVITLMLTLFASWAMGFTLNRVSLFALIFSIGILV
DDAIVVVENIHRHMALGGRTLREAIPEAVSEVGGPTILATFTVIAALLPMAFVSGLMGPY
MRPIPINASAGMVLSLAVALIVTPWLALKLLGHHRHGGEGEGDHAPSDSRLHRLFERVMT
PFIVGEKARRRRRLLFAAMGVLVLAAVGLVVVKAVVLKMLPFDNKSEFQVVLDMPEGSTL
QHTNRVLGELARAVATVPEVANWQGYAGTAAPITFNGLVRQYYLRSGANVGDLQVNLVDK
SLRDRQSHAIALAIRPALAKIGARYGASVKIVEVPPGPPVLAPIVAEVYGPDYDTVRRTA
LALEKRFKANTDVVDVDSSVEDAAPREVMVVDRERATRLGLDQAGIAQALRTALSGEDAT
WLMDGHARYAVPVRLRLPAGDQASLAQLLALEVRAQNGALVPLSEVVSVRPASWEQAIYH
KDLLPYAFVTGDDAGATDSPLYGMFSLVGDLRDHDVAGARLGQHYIAQPEDTSAPSVKWD
GEWQITYETFRDMGLAYSVGLLLIYLLVVGQFKSYLVPLIIMAPIPLTVIGVMPGHALVG
AQYTATSMIGMIALAGIIVRNSILLIDFINHALAAGRPLGEAVVEAAAVRAKPIVLTGVA
AMVGGFFIIDDPIFQGLAVSLIFGILVSTVLTLVVIPLLYYAWLAHRAPHIEGDVT
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgaagctcggcttctccggacgcatcgcacgcgccttccaggcctccccg
ctcaccccgatcctggcgctggccgcgctcctgctgggactggccgcggcggcgatcacg
ccgcgcgaggaagagccgcagatcgacgtgacgatggccaatgtgatggtgccgttcccc
ggcgccgacgtgcgcgacgtagaaaacctggtggcgttcccgctggagcagaagctttcc
gagatcgagggcgtcaagcacgtctattcggtgagccagcccggcgtggccgtgctgacg
gtcgagttccaggtgggtgtgccgcgccagagcgcgatcgtgcggctgtacaaccaggtc
ttccagaaccaggacttcgtgccgcccgggctgggcgtcggtccgccgctgatccggccg
atgggcatcgacgacgtgccagtgatggcgatcacgctgtggagcgatgcgccggcgcag
aaccccacgcggctggccgaggtggcgcacacgctggagaccgatctgaagcgcgtgtcc
ggcacgcgcgacgtctacacgctgggcgcgccgacgcgcgcggtggtggtggaactggat
gccgcgcggctggccgcctacggcatggcggtcggcgacctcgccggcgcgctcaaggcg
gcgaacgtggttgcccaggccggcgaccgggtagccggtgaccgcgacgtgccagtcact
gccggcactttcctggccagcgccggggacgtggcccacctggtgatcggcctcaagcac
ggccagccggtgttcctctccgacgtggcgcgcatccatgccggcgcggacctgccgagc
cgctacgtctggttcggcgcgccggcgggcaacggtgggccggccggcaacgcaccggcc
gtcaccctcgcggtggccaagaagccgggcgccaatgccgccgacatcaccactgccatc
gccgcgcggctggccgcgctgcgcaacgtgaccatcccggccgacgtgcacgtcacggtg
acccgcgactacggacagaccgccaccgacaaggcggacaagctgatccacaagctcatc
ttcgcgaccggctcggtggtgctgctggtgctgttcgcgctgggctggcgcgaggcgatc
gtggtcgggagcgcggtggtcatcacactgatgctcaccctgttcgcctcgtgggcgatg
ggcttcacgctcaaccgcgtatcgctgttcgcgctgatcttctcgatcggcatcctggtc
gacgatgcgatcgtggtggtggaaaacatccaccggcacatggcgctgggcgggcgcacc
ctgcgcgaggcgatccccgaggcggtgagcgaggtcggcgggccgacgatcctggcgacc
ttcacggtgatcgccgcgctgctgccgatggccttcgtgtcggggctgatggggccgtat
atgcggccgatcccgatcaacgcctcggccggcatggtgctgtcgctggcggtggcgctg
atcgtcacgccgtggctggcactcaagctgctgggccaccatcggcacggcggcgaaggc
gaaggcgaccacgcgccgtccgacagtcgcctgcaccgcctgttcgagcgggtgatgacg
ccgttcatcgtcggcgagaaggcgcgccgtcgccggcgcctgctgttcgccgcgatgggc
gtgctggtgctggccgcggtcgggctggtggtggtcaaggcggtggtcctcaagatgctg
ccgttcgacaacaagtccgagttccaggtggtgctggacatgcccgagggcagcacgctt
cagcacaccaaccgggtgctgggcgaactggcccgggccgtggccacggtgccggaggtc
gccaactggcagggctacgccggcaccgccgcgccgatcaccttcaacgggctggtgcgc
cagtactacctgcgcagcggcgccaacgtcggcgacctgcaggtgaacctggtcgacaag
tcgctgcgcgaccgccagagccacgccatcgcgttggcgatccgcccggcgctggcgaag
atcggcgcccgctacggcgcgtcggtgaagatcgtcgaggtgccgcccggtccgccggtg
ctggcaccgatcgtcgccgaggtctatgggccggactacgacacggtgcggcgcacggcg
ctggcgctggagaaacgcttcaaggccaatacggacgtggtcgacgtcgactccagcgtc
gaggacgccgcgccgcgcgaggtgatggtggtcgaccgcgagcgcgccacacggctgggc
ctggaccaggccggcatcgcgcaggccctgcgcaccgcgctatccggcgaggacgccacc
tggctgatggacggccacgcccgctacgccgtgccggtgcgcctgcgcctgccggccggc
gaccaggcctcgctggcgcagttgctcgcgctggaagtgcgcgcgcagaacggtgcgctg
gtaccgctgtccgaagtggtgagcgtgcgcccggccagctgggagcaggcgatctaccac
aaggacctgctgccctacgctttcgtcaccggcgacgatgccggcgccaccgacagcccg
ctgtatggcatgttcagcctggtcggcgatctgcgcgaccatgacgtcgccggcgcgcgg
ctgggccagcactacatcgcgcagccggaagacaccagcgcgccctcggtgaagtgggac
ggcgagtggcagatcacctacgagaccttccgcgacatgggcctggcctactcagtgggc
ctgctgctgatctacctgctggtcgtcggccagttcaagagctacctggtgccgctgatc
atcatggcgccgatcccgctgaccgtgatcggcgtgatgccgggccatgcgctggtcggc
gcgcagtacaccgccacctcgatgatcggcatgatcgcgctggccggcatcatcgtgcgc
aactcgatcctgctgatcgacttcatcaaccacgcgctggccgccgggcggccgctgggc
gaggcggtggtcgaggcggccgcggtgcgcgccaagccgatcgtgctcaccggcgtggcc
gcgatggtgggcggcttcttcatcatcgacgatccgatcttccagggcctggcggtatcg
ctgatctttggcatccttgtgtccacggtgctcacgctggtggtgattccgctgctttac
tacgcatggctggcgcaccgggcgccgcacatcgaaggagacgtgacgtga
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