Formica exsecta (narrow-headed ant): 115235057
Help
Entry
115235057 CDS
T07422
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
fex
Formica exsecta (narrow-headed ant)
Pathway
fex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115235057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fex03019
]
115235057
Messenger RNA biogenesis [BR:
fex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
115235057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_16
TPR_19
TPR_8
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_17
TPR_12
TPR_11
ANAPC3
TPR_9
TPR_6
ChAPs
ARM_TT21_C
TPR_7
PknG_TPR
BTAD
DUF7017
Alkyl_sulf_dimr
ARM_TT21
TPR_21
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
115235057
NCBI-ProteinID:
XP_029662452
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLETMKKCKKVLKKDKNNYTALILLARAMQEIEEFKSQVA
LVLQKAVEIQPNNPLAWQGLVAYYEKMPQDNDNWEKLALAYCKLLQLDSDSPKFTYFINK
VSEIVLRTKNDDILSQVLDTLSVLREVSTKEKTSLIDKTLAWVLTEYSDNSMTKYQEFYE
DILASVINDTDLVNRQEYYRKYLKMLYDSNKFTILLTAAQNMHSQFPQDAYPLEWICCVY
YEEAILNEKDLDINITHIYESLLKLNANSEVALIAKAAYLKSTEKLINSRECLNQAISLN
AQLFYAWLLLSKVYYKLYCWEQTENASKQALQLMKPHLKDKLYCKVKLRLLEAMSRSNNK
QKLTQTQQTCDELLKTEPSVQLQLIYARTSVLLDKPDAITVLSSLESQDEIKIQVLILKA
LYLKKNKQYEEAINILELALNNSEAWLTFGKIYWDMGDYNHSLMAFLNGVQADRNNWECM
IYLGHYYREHGNDIERSRRCYHTALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQRVTM
QQATGVKWAWLQLGLQYLDQGDAGQAIKALQHVIRADPNDNHSWESLADAYLVRGAHTSA
LKSYQRALQLSPEALYPMIQLANIKLLIGQHKEAKEDFESILKNDKQYILALKGLAQACL
GLARENITKQFLCRARENLQQAANNLTDAIMIRSDLSCNWKLLGDVCFRTAGMPEKYCYL
RVKPILMKCDSTEEHMSIRGNEILRLSIRCFCRALSTAQNSALLWHDLACCYSMQLDRDS
TVNKDDTAAKCLAAAKHAVKLCPQSWLHWNILGVICISPYIKNYALAQHCFVMAIDRESN
NAIAWSNLGTLYLHLGDIYRANEAFSRAQRADPSYINSWIGQGIIAENLLRKEAMDLFRH
STQLGYHNEAALGYAHWVLTTLLNSAMKRDPLFVYVIEKMHAIPAAADVLTWYTEHVPND
VYALNTHGLLLERLKLYNTAVKQFIKALKLSQDEEGDMISINLARVLIQIGKHEQAIELC
RQVKRGSFNSQCHLALSLFKAKQYEESYNMYEAALHWMADTETHKANVLCAMAAIAYIFQ
GADAVKTLLFQCIQIKPPTIAGFLATAALGILHNDFNLTSLVLKELEPYTDHHEYGHHIV
TLSAYYHVIQGNLTEAIRIFSKAIFRHPNDIKYWVRLVRVSLLNKNLDIFRKCAQTALVL
SRNTSMTDIVYVACASAYSHFGTTEGLRQAQKNIFTYPTNVESWANFIAALLPRCTDKDS
KINNQWMSSLISMIRSQFQTSKYMSQWLLHNTQELNSS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacataaaaatcttgctgaaggaagcccgtgagtcttttaagcagaatgaa
tatctggagactatgaaaaaatgtaaaaaggtcttgaagaaagataaaaacaattacaca
gcattaattttgttagctcgtgccatgcaagaaatagaggaattcaaatcacaggtagcc
ttggttcttcaaaaagctgtggagatacaaccaaataatccattagcttggcaaggtcta
gtggcatactatgaaaaaatgcctcaagataatgacaactgggaaaagttggctctagct
tactgcaaacttttacaattggatagtgattctcctaagttcacatattttatcaataaa
gtctcagaaattgttctgagaaccaagaatgatgacatactgtctcaagtattagataca
ttgagcgtattacgagaagtttctaccaaagagaagacaagtctaattgataagactcta
gcatgggttttaacagagtactctgataatagtatgaccaagtatcaggaattttatgaa
gatatattagcatctgtaataaatgatacagatttagtgaatagacaagaatattacagg
aaatatttaaagatgttatatgattcaaacaagtttactattttattaacggcggctcag
aatatgcattctcaatttccacaagatgcttatcctttagaatggatctgctgtgtctat
tatgaagaggctatattgaatgaaaaggatcttgacattaatataactcatatttatgaa
tctcttttaaagctgaatgcaaattctgaggttgcattaattgcaaaggcagcatatttg
aagagcacagagaagttaatcaattctcgcgaatgtttgaatcaagcaatctcgttaaat
gcacaattattttatgcctggttattattaagcaaagtatattataaactttattgctgg
gaacaaaccgagaatgcttccaaacaagcattacaattgatgaaacctcatttgaaggac
aaattgtactgtaaagttaagttgagattacttgaagcaatgagtagaagtaataacaaa
caaaagttgacgcagacacaacagacatgcgacgagttattgaagactgaaccttctgtc
caattgcaattgatatatgcacggacaagtgtgttactggataagcctgatgctattact
gtattaagtagcttggagtctcaggatgaaattaaaattcaagttcttatactcaaagca
ttgtacctaaagaagaacaagcaatacgaggaagccattaacattctcgagctagctcta
aataattctgaagcttggttgacgtttggtaagatatattgggatatgggagactacaat
cacagcctgatggctttcttaaatggcgtccaagcggatcgcaataattgggaatgcatg
atttatttgggacattattatcgcgaacacggtaatgacattgaacgttcgagaagatgt
tatcatactgcattgcaaatcaatccaaattctgaggaagctggcattggactgagcaca
gcttatcggcttctgaagaacactgatgccaacatacagctattgcaaagggtaactatg
caacaagctacaggagtgaaatgggcctggctccaattgggtctacagtatttagatcaa
ggtgatgcgggacaagctatcaaggcattacagcatgtgatcagagccgatcctaacgac
aatcatagctgggaatctctggcggatgcatatttagtgcgcggtgctcacacatcggcg
ttgaaatcgtatcaacgtgcgctacagctgagtccagaagccttgtatcccatgatacaa
cttgcgaatatcaaactgctcattggtcagcataaagaagccaaagaggatttcgaaagt
atattaaaaaatgataaacaatatattcttgcattaaaaggtttagctcaagcgtgtttg
ggtctggcaagggaaaatatcacaaaacaatttttatgtcgtgcgagagaaaatctacaa
caagcggcaaataatcttacggatgctattatgatacgtagtgatctatcctgcaattgg
aaattacttggcgatgtctgttttagaacagctggtatgccagaaaaatattgctactta
agagttaaacctattttaatgaaatgcgatagtaccgaggaacatatgagcattagagga
aatgaaatactcaggctgtcaataagatgcttttgtcgagcactgtcaaccgcgcaaaat
tctgcgttgttatggcatgatttagcgtgctgttactcgatgcaattggaccgcgattct
acagtcaacaaggatgacacggcagccaaatgtcttgccgctgcaaaacatgccgtcaaa
ctttgtccgcagtcatggctacattggaacattttaggcgttatttgtatatcgccatat
ataaagaattatgctctggcccagcattgtttcgttatggcaatcgatcgagaatcaaac
aatgcaatagcttggagcaatctgggaacattgtatctgcatttaggagatatctataga
gcgaacgaagcattctctcgagcgcaacgtgcggatcctagttatataaatagttggata
ggccaaggaataatcgcggagaacttactgaggaaggaagcgatggatttattccggcat
tcgacgcaattgggttatcacaatgaagcggctttaggctacgctcattgggtactcacc
acccttctaaattctgcaatgaaaagagatccgttatttgtttacgttatcgaaaaaatg
cacgcaatacctgcagcggccgatgttcttacctggtatacagaacatgtaccaaatgac
gtttacgctctaaatactcatggtctgttattggaacgattgaaattgtataacacggcg
gttaagcaatttatcaaagctttaaaactgagccaggacgaagaaggagacatgatatcc
ataaatttggcacgtgtcctgattcaaatcggaaaacatgagcaagcgatcgagttatgt
agacaagtgaaacgtggaagtttcaattctcaatgccatctggcattatccttattcaaa
gctaaacagtatgaagaatcgtacaatatgtacgaagcagctctacattggatggcggac
actgaaacgcacaaagcgaatgttttatgcgcgatggcagcgattgcttacatttttcaa
ggagcggacgctgtcaaaaccctgctattccaatgcatacaaataaaaccacccaccata
gctggcttcttggcaaccgctgctttaggaattctgcacaatgacttcaatttgacttct
ttagtattgaaggaattggaaccatacacagatcatcacgagtatggtcatcatatcgtc
acattgtctgcatattatcatgttattcaaggaaatctcacggaagctattcgaattttc
tccaaagctattttcagacatcctaatgacattaagtattgggttcgtcttgttagagtt
tcattgttaaacaaaaatttagacatcttccgtaaatgtgctcagacagcgttggtttta
agcagaaatacatccatgactgatattgtatatgtcgcttgcgcatccgcgtacagtcat
ttcggtacgacagagggccttaggcaggctcagaaaaatatatttacatatcccaccaat
gttgagagctgggctaattttattgctgctcttttacctagatgtacagataaggattcc
aaaattaataatcaatggatgtcatcattaatatccatgataagatcacaattccaaact
tccaaatatatgtcacaatggctgcttcataatacacaagaacttaacagttcttaa
DBGET
integrated database retrieval system
