Flavobacterium faecale: FFWV33_00150
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Entry
FFWV33_00150 CDS
T05515
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ffa
Flavobacterium faecale
Pathway
ffa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ffa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFWV33_00150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ffa03021
]
FFWV33_00150
03400 DNA repair and recombination proteins [BR:
ffa03400
]
FFWV33_00150
Enzymes [BR:
ffa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFWV33_00150
Transcription machinery [BR:
ffa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFWV33_00150
DNA repair and recombination proteins [BR:
ffa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFWV33_00150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
efThoc1
AGA2
Motif
Other DBs
NCBI-ProteinID:
AWG20044
UniProt:
A0A2S1L8L0
LinkDB
All DBs
Position
complement(40212..44024)
Genome browser
AA seq
1270 aa
AA seq
DB search
MITNQTERLNFASTKNIPAYPDFLDVQVKSFQDFFQLETKSDERGNEGLYNTFMENFPIT
DTRNNFVLEFLDYFVDPPRYTIQECIERGLTHSVPLKARLKLYCTDPEHEDFETIVQDVY
LGTIPYMTPSGTFVINGAERVVVSQLHRSPGVFFGQSFHANGTKLYSARVIPFKGSWIEF
STDINSVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLAEEIKVSKTGLKKYIGRKL
AARVLNTWHEDFVDEDTGEVVSIERNEIILDRDTIIDKDNVEEIIDSNVKSILLHKEDAN
QADYAIIHNTLQKDPTNSEKEAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYNLGEV
GRYRMNKKLQLDIPMEKQVLTKEDIITIVKYLIELINAKADIDDIDHLSNRRVRTVGEQL
SQQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNP
LAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLGVYAK
VNGMGFIETPYRKVTDGVVDLVSTPIYLSAEEEEGMLIAQANIAMDDTGKMTSDFVIARQ
EGDFPVITPSEVHYTDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLIRPEAP
IVGTGLERQVASDSRVLINAEGHGTVEYVDANIITIKYDRSEEERMVSFESDDKTYNLIK
FRKTNQGTSINLKPIVRKGDRVIPGQVLSEGYATQNGELALGRNLKVAFMPWKGYNFEDA
IVISEKVVRDDIFTSIHVDDYSLEVRDTKLGNEELTNDIPNVSEEATKDLDENGMIRIGA
EVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKASPSLHGVVLDKKLFA
RAVKDKRKRTQDKDALGSLEMDFEVKFSDLKDKLIEKLFLIVNGKTSQGVMNDLGEEVLP
KGKKYTQKMLYAVEDFAHLSKGQWVADDATNKMVNDLIHNYKIKLNDLQGGLRREKFTIT
VGDELPAGILKLAKVYIAKKRKLKVGDKMAGRHGNKGIVARIVRHEDMPFLEDGTPVDIV
LNPLGVPSRMNIGQIYETVLGWAGMNLGKKYATPIFDGASLDQINAITDEAGVPRFGHTH
LYDGGTGERFHQAATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFG
EMEVWALEAYGASSTLREILTVKSDDVIGRAKTYEAIVKGESMPEPGLPESFNVLMHELK
GLGLDIRLEE
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaatcagactgaaagattgaattttgcctctacaaaaaacattcctgcatat
ccagattttctagatgttcaggttaaatcttttcaagatttttttcaattagaaactaaa
tcagatgaaagaggcaatgaaggactttataataccttcatggaaaattttccaattaca
gatacaagaaataactttgtattggaattcctagactactttgtagatccaccacgttac
acaatccaagagtgtatcgaaagaggtttgacacacagtgtacctttaaaagcaaggttg
aaactgtactgtacagatccagaacacgaagactttgaaacaattgttcaagatgtatat
cttggtacaattccttacatgacaccaagcggaacatttgtaattaatggagctgaacgt
gttgttgtttctcaattgcatagatcaccaggggttttctttggtcaatcttttcatgct
aatggtacaaaattatactctgctagagtaattccgttcaagggatcttggattgaattt
tctacagatatcaacagcgtaatgtacgcttacattgacagaaagaaaaaattacctgtt
actactttattccgtgcaatcggttttgaaagagacaaggatatccttgaaatctttgac
cttgcggaggaaattaaagtttctaaaacaggtcttaaaaaatatatcggtagaaaatta
gctgctcgtgtattaaacacatggcatgaagatttcgtagatgaagatactggtgaagta
gtttctatcgaacgtaacgaaataatccttgatagagatacaattatcgataaagataat
gtggaagaaatcattgattctaacgttaaatctattttgttacataaagaagatgctaat
caagctgattatgctatcatccacaatacgttacaaaaagatccaacaaactctgaaaaa
gaagctgttgagcatatctacagacaattgcgtaacgcagaaccgcctgatgaagaaact
gctcgtggtattattgataaattgttcttttctgaccaacgttacaacttaggtgaagta
ggtcgttatagaatgaacaaaaaattacagttggatatcccaatggaaaagcaagtgctt
accaaagaagatatcataactatcgtgaagtatttaattgagttgattaatgcgaaagca
gatattgatgatattgaccacttatcaaaccgtcgtgttagaacagttggagaacaattg
tcacaacaatttggtgttggtttagcacgtatggctagaactattcgtgagagaatgaac
gttagagataacgaggtgtttacaccaattgatttgattaatgctaaaacattatcatca
gttatcaactctttctttggtacgaaccagttgtctcaatttatggatcaaacgaatcca
ttagctgagattacgcacaagagaagattatctgccctaggacctggtggactttcgaga
gaaagagctggttttgaggttcgagatgttcactatacgcactacggacgtttatgtcct
attgaaactccagagggaccaaacattggtttgatttcatctcttggtgtttatgcgaaa
gtaaacggaatgggattcatcgaaacaccttaccgtaaggtaactgatggtgtagttgat
ttagtatctactccaatttacttaagcgctgaagaagaagaaggaatgttaatcgcacaa
gcgaacattgctatggatgatacaggaaaaatgacttctgactttgtaattgcacgtcaa
gaaggtgatttccctgttattacgccatctgaggtacattatacagacgttgcaccaaac
cagattgcttctatatctgcatctttgattcctttcttggagcatgatgatgcgaataga
gccttgatgggatctaacatgatgcgtcaggccgttccattaatacgtcctgaagctcca
attgtaggtactggtcttgagcgtcaagtagcttctgactctagagtattaatcaatgct
gaagggcatggtactgtagaatatgttgatgctaatatcattacaattaaatacgatcgt
tctgaggaagaaagaatggttagttttgaatcggatgataaaacatacaatctaattaaa
tttagaaaaaccaaccaaggaacaagtattaacttgaaaccaatcgtaagaaaaggggac
agagttattcctggtcaagttttatctgaggggtatgctactcaaaatggtgagcttgct
ttaggtcgtaacttgaaagtggcgtttatgccatggaaagggtacaattttgaggatgca
atcgtaatttctgaaaaagttgttcgtgatgatatctttacttcaatccatgtagatgat
tactcattagaagtaagagatacaaaattaggtaacgaagaattaacgaatgatattcct
aacgtttctgaagaggctactaaagacttagatgaaaacggtatgattagaattggtgcc
gaggttaaacctggtgatattcttattggaaaaattacaccaaaaggagaatctgatcca
actccagaagagaaattgcttcgtgcaatcttcggagataaagcaggtgatgtaaaagat
gcttcattgaaagcttctccatcacttcatggtgttgttcttgataaaaaattgtttgca
agagcagtaaaagacaaaagaaaacgtacgcaagataaagatgctttgggatctcttgaa
atggatttcgaagttaaattttcagacttgaaagataagttgatcgaaaaacttttcttg
attgtaaacggaaaaacatcacaaggtgtaatgaatgatttgggtgaagaagttttacca
aaaggtaaaaaatatactcaaaaaatgctttacgctgttgaagattttgctcacttaagc
aaaggtcaatgggtagctgatgatgcaactaataaaatggttaatgatttaattcataac
tataaaattaagttgaacgatttacaaggtggtttgagaagagagaagttcactattact
gttggagatgaattgccagctggaattttgaaattggctaaagtatatatcgctaagaaa
cgtaagttgaaagttggggataaaatggcaggacgtcacggtaacaaaggtattgttgct
cgtatcgttcgtcatgaagacatgcctttcttggaagacggaacgccagttgatattgta
ttgaatccacttggagtaccttctcgtatgaacattggtcaaatttatgaaacagttctt
ggatgggctggtatgaatttaggtaaaaaatatgcaacaccaatttttgatggtgcatca
ttagaccaaattaatgcaatcactgatgaagctggtgtacctcgttttggacatacacat
ctttatgatggtggtactggagagcgtttccatcaagcagcaaccgtaggtgtgatctat
atgttaaaattaggacacatggttgatgataagatgcacgcacgttctatcggaccatac
tcattgattacgcaacaaccattgggtggtaaagctcaatttggaggtcagcgttttgga
gagatggaggtttgggcacttgaggcttatggagcttctagtacattacgtgaaatctta
accgtaaaatctgatgatgttattggtagagctaaaacgtatgaagctatcgtaaaagga
gagtctatgccagagccaggattacctgaatcattcaatgtattgatgcatgaattgaaa
ggtcttggtcttgatattcgtttagaagaataa
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integrated database retrieval system
