Fusarium falciforme: NCS54_00380700
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Entry
NCS54_00380700 CDS
T09198
Name
(RefSeq) Hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ffc
Fusarium falciforme
Pathway
ffc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS54_00380700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffc03019
]
NCS54_00380700
Messenger RNA biogenesis [BR:
ffc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NCS54_00380700
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NCS54_00380700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
77789756
NCBI-ProteinID:
XP_053005339
LinkDB
All DBs
Position
3:join(1519948..1520199,1520258..1520582,1520636..1526577,1526634..1526672)
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AA seq
2185 aa
AA seq
DB search
MVPPPRAGSFSPNPAQTLQTGSSHSPHPSQAAILSAGASPSASSPTGTNSLTKIVVAQVY
LLLSTIKEDKDRAKWELQVDQLKKLIDEHGMEVFSKYFTRLVAGNAPQIFPGLNRPVSNP
GNYHILVGEMRKIAHDPEQASKIAESIESGTEDIFRDFDLSTFMEHFKLDALEKTLLALA
FKLGSRTDLKTKADAILSTNFPTFVDIISRPELEAHADLTPSFIALIIDRFLQYHPPSFN
PSSRRDLESYLAKRYISVDQPPPSEVLAALDLSRVLADRPSNGLVRYLQKTGIEFTRDEE
TCVSYLQNRASNLQLNAEQVSAALTFTTITQTPQHDPNVLVAALRRVLPKSFDWMEVIGY
FDQPSARVSSQQFLRLYNAFLPIAQDPNSDLDIQRLWGGVWRHPEAQLSFVSAYASLTPE
QLDATTIPGLRRSITLDDYANSPPNVRERAAVAVKHPLVSVAALSSIFNVALSSVVASTS
VEAKRLFQEVVVPNLDIFLVSAFEVPRQHWAAMAIDTLNSLFENFLYKRSPEYDFVLDSL
WKKDKEWVTQRLIDAHAIKPVDLPLVFEHAVKHNWLDSLVYLANGFGIDLAALAHAEGYL
DLSKWARFYADRGNEMSRTLLQFLMIKANLESQYQRGGPDGQPLAKTTTTLQVRTVSALL
HILEDLLPKGPVQELIIIQRHCIIAYPRLINYGEGYDDIIDANGKDGNALPPTANSKMEE
HYKKMYSDEMQVRNIVEVLDRYKHSKDALDQDVFACMIHGLFDEYSHYVDYPLEALATTA
VLFGGIISHKLISGLPLQIGLGMILEAVRDHVPEDPMYKFGLQALMQLLVRFREWPLFCR
QLVLIPGLMGTEAHKKAEEVVMEHEEDLSRGPNGAGTPHGVRYPGDTFPNGNSEEQANAD
RQAPAFSSINVDPPAPEMDFEDPNEVEQDKVQFVLNNITEGTLVSMSSELRETLERRHQQ
WFACQLVEERAKMQPNYHHVYLELVRLLEDTSLWGEVLRETYVSVSRMLNSEATMQNSTE
RTHLKNLGGWLGLMTLARDRPIKHRNIAFKQLLIEAHDTKRLIVVIPFVCKVLVQGATSA
VFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRPVIE
EPADVPPQEQIDAFENLSLNGMGSAVGAGLSPQAIAPTIPDLGPLINIPPTNEMVVTSTR
LHDIVRTALSRALQDIIQPVVDRSVTIAAISTQQMIHKDFATEPDENRVRTSAINMVKAT
AGSLALVTSKEPLRANFTNYMRNLSNDIPQGLPEGTIIMCVNSNLDLACNIIEKQAEERA
VPEIEEMMEGELEARRRHRMQRPNEPYFDSSLSRWAMTIPHPYKLSPTSNGLNSDQMAIY
EDFARQPRSAAAPTPSHGPSTSDATRSLANEVLQEQFTAMPNIPTPAETPAIQQHLSTQM
QPYAPVHAGANAISNGRSPGFTMDVRGLAERVNKLLQELLRVATEAREDHFQGLPRPHPV
LDVVDALVQHIIKTSQNSEEFAIYAAEQISQIIFSPVEDNLTLESLVHVLETLRKISGPA
LNNRVRALFSQQPGPTFLSLPLLAALTRTDLLDWRNIDLAMSKALQARKEGSLDFLEHML
DLTLLNNRPIALYADFVRTLEAAWAWIREDPGSAIGQRVRSKLIGSGLSHPSQADDQALY
RQDQMDYVLDEWVHLCNNHNASDASGSIFVQQLQAKQVIRDRDDFFVFLRTAIDTSVERF
EHTMHPGALTDVYITVDALAKLIGTFVSLQFDTSSTRASFVDSTMALITLVLNHHSVKRG
EQLNQRVFFRLLSMLLHEIHAISEDFSEEERRDILLRIASRLAGMGPALIPGFTYGWLSL
VQHRAFMPVLLQLPDGAGWGLFVDLVCQLFESLGDQLKVFEVSNIAKDIYRAAFKLLIIL
QHDFPDFVAANHVRICASIPPHCTQLINAVLAANPQQSPKFVEMNAKDRSDESRVHPGLV
NEATAILRDAGLLGVVDQALQSGPSEDIVANITHSMTHNAPKVTTYGHVPVAVNLAVINA
VVIYIGQHAADQAAQAGTAVTVSGDEHEVSTLSLIIHELPAEARYYLLVSVVNQLRFPNA
HTDFFSQALLYIFSKDLEDPEETEIRQGITRVLLERLVSFWPQPWGLLFTVVEIVKCDKY
NFFELPFIKAIPEVAEKFGQVVQRG
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggtcccaccacctcgagcgggatcattttcgcccaatcctgcgcagactcttcagacg
ggttcgagccattctccccacccatcgcaggccgccatcctcagtgctggcgcaagccca
agcgccagcagtccgacgggcaccaactccctgaccaagattgtcgtggcccaggtctat
cttctgcttagcaccatcaaggaggataaggaccgcgccaagtgggaattgcaggttgac
caattgaagaagctcatcgatgaacacggtatggaagtcttctcaaagtacttcacccgg
cttgtcgccggcaatgcgccgcagatattccccggcctcaacaggcctgtctcgaatcca
ggcaactatcacatcctcgtcggcgagatgcggaagattgcgcacgatccagagcaagcg
agcaagatcgccgagtcaattgagagcggcactgaagacatcttccgcgactttgacctc
tcgacctttatggagcatttcaagctcgacgccctggaaaagaccctgttagctctggcc
ttcaagcttggctcccgaaccgacttgaaaaccaaagccgacgctatactctcgacaaac
ttcccaacctttgtcgatatcatctctcgacccgaactcgaagcccatgctgaccttacc
ccctccttcatcgccctaatcatcgaccgattccttcagtatcaccctcccagctttaat
ccttcttctcgtcgagatctcgagagctacctcgcaaagcgatatattagcgtggatcaa
ccgccgccttccgaggttctagctgctcttgacctgagcagagtgctggccgatcgacct
tccaatggcttggttcggtacctccaaaaaaccggcatcgaattcacgcgagacgaggaa
acttgtgtctcgtatctacagaaccgtgccagcaacctacagcttaacgccgaacaagtc
tccgccgccctgacgttcacaactatcacccaaaccccgcaacatgaccccaacgtcctg
gtggcggccctcaggagggtactgccgaaatcctttgactggatggaggtgattggttat
ttcgatcagccgtccgctagggtctcttcccagcagttcttgcgtctctataacgccttt
ttaccaatagcgcaagacccaaactctgatctggacatccagcggctctggggtggcgtg
tggaggcatccagaggcgcagctatcctttgtcagtgcatacgcctctctaacccccgaa
cagcttgacgcgacgacgatccctgggcttcggcgcagtattaccctagacgactatgca
aactcccctcccaatgttcgcgagcgagctgctgtggctgtcaagcatccgctcgtttct
gtggctgctctctcctcaatcttcaatgtcgcactcagttccgttgtggcctccacaagc
gtcgaagcgaagaggctgtttcaagaagtggttgtcccgaatctcgacatctttctcgtt
tccgctttcgaggtccctcgccagcattgggcagcaatggccattgatacactgaactcc
ttgttcgagaacttcctctacaaacgctcacctgagtacgacttcgttctcgatagcctg
tggaagaaggacaaggagtgggtaacgcagcgcttgattgacgcgcacgccatcaagcct
gttgatcttccccttgtttttgagcacgcagtcaagcacaactggttggattcgcttgtg
tacctagccaacgggttcggtatcgacttggctgcgctggctcacgctgagggatatctg
gacctgtctaagtgggcacgattctacgcagaccggggaaacgagatgtctcgtactctt
ctgcaattcctaatgatcaaggccaacctagaaagccaataccaacgaggcggccctgat
gggcaaccgcttgcaaagactacgacaactctgcaggttcgaaccgtatcagcgctatta
cacatcctcgaagatctcttgcccaagggtcctgtccaggagctcatcataattcagcgg
cactgcattatagcgtaccctcgactgatcaattatggcgaaggctacgacgacatcatc
gacgccaatggcaaggatggaaatgccctccccccaaccgctaacagtaagatggaggag
cattacaaaaagatgtacagcgatgaaatgcaggttcgaaacatcgtcgaagttcttgat
cggtacaagcattccaaggatgctctggatcaagatgtctttgcctgcatgattcatgga
cttttcgacgagtacagccactacgtcgattatccactggaagcccttgccacaacagcc
gtgttgtttggcggcatcatctcgcacaagctcatttcggggctgcctctccagatagga
cttgggatgatcttggaagcagttagggaccatgtgcccgaggatcccatgtacaagttc
ggtctgcaagcgctgatgcaactcctagtccggttccgggaatggccccttttctgtcgg
cagttggtcctgatcccgggtcttatgggaacagaagcgcacaagaaggccgaggaggtc
gtgatggagcatgaagaagatctttctcgcggcccgaacggagcgggaacgccacatgga
gtccgctatccaggagacacgtttcccaacggaaactctgaagaacaagccaatgcagac
cgccaagctcctgctttctcctccatcaatgtcgaccctccggcccccgagatggatttc
gaggaccccaacgaagtcgagcaggataaggtccagtttgttctcaacaacatcacggaa
ggaacactggtatcgatgtccagcgagctgcgagagaccctggagcgaaggcatcagcaa
tggttcgcctgccagcttgtcgaggagcgtgccaagatgcagccaaactaccatcatgtg
tatctcgaactcgtccggctcttggaggacacgtccctttggggcgaggtgctgcgtgag
acgtacgtcagcgtgtcccgcatgcttaactcagaggctacgatgcaaaactctacggaa
agaacgcatctcaagaatctcggcggctggctcggtctcatgactcttgcgcgcgaccga
ccgatcaagcacaggaacattgcattcaagcagctactgatcgaagcgcatgatacgaag
aggcttatcgtcgtcatcccttttgtgtgcaaagtccttgtccaaggtgccacatcggcg
gtattccggcctcctaacccttggctgatggatattatccacctactgatcgagttgtac
catcatgctgagctgaagctgaatctcaagttcgagattgaggtcctttgcaagggtttg
aatctcgatcacaagagcatcgagccctcgggagaaatcctcaaccgaccggtcatcgag
gaaccagcggatgtaccgcctcaagaacagatagatgcctttgaaaatctatctctgaac
ggcatgggatccgccgtcggggctggcctctccccccaggccattgcaccgactattcca
gacctcggccctctcattaacattcccccaaccaacgagatggttgtcacctccacccga
ctccacgatattgtgcggactgctctcagtcgagccctgcaggatatcattcagcctgtt
gtggaccggtccgtcactattgctgccatctcaacgcagcagatgattcacaaggatttc
gctaccgagcccgatgagaaccgcgtgcgaacctctgctatcaatatggtgaaagccaca
gcgggaagcctcgcgcttgttacatccaaggagccacttcgagccaactttaccaattac
atgcggaacctgtcgaacgacattcctcaaggtctgccagagggtaccataatcatgtgc
gtcaactccaacctcgacttggcctgcaacatcatcgagaagcaggcggaggaaagggcg
gtgcctgagattgaggagatgatggagggagaactggaagctcgtcgacgacaccgaatg
cagcgacccaacgaaccttacttcgactcgagcctcagccgctgggccatgaccatcccg
cacccgtacaagctctcgccaaccagcaacggattgaacagcgaccagatggccatatac
gaggactttgctcgacaaccccgcagcgccgctgcccctactccctctcacggtccctcg
acatccgacgcgactagatctctcgccaacgaggtcttgcaggagcaattcacggctatg
cccaatataccaactcctgctgaaacccctgcaattcagcaacatctaagcactcagatg
cagccctatgccccggtccacgcaggagccaatgccatatctaacggaaggtcgcctggg
ttcaccatggatgtccgcggcctagctgagcgagttaacaagctacttcaggaactcctg
agggtagcaaccgaggctcgcgaggatcatttccaaggcctgccacgaccccatcctgtc
ctggacgttgtcgatgctttggttcagcacatcatcaagacatcgcagaactcggaggaa
ttcgccatatacgccgctgagcagatcagccagatcatcttctcgccagtggaggacaat
ttgacgctcgagagcctggttcatgttttggagacgttgagaaagatatccggccctgca
cttaacaatcgtgtccgggctttgtttagccaacagccagggcccaccttcttgagccta
ccattactggcggcattgactcggactgacttgctggattggaggaacatcgatcttgcc
atgtccaaggccctccaagcccgtaaggagggctcgctcgacttcttggagcacatgctt
gaccttacacttctcaacaaccgccctatcgccctgtatgctgattttgtcaggaccctg
gaggcagcatgggcttggatcagagaagaccccggctcggctattggtcaacgagtcagg
tccaagctgatcggctctggattgtcgcacccttcacaggcagacgaccaggcgctatat
cgacaagatcagatggactatgtgctggacgagtgggttcacctgtgcaacaaccacaat
gcttcggacgcgtctggatcgatctttgtgcagcaactgcaggccaagcaggttatccga
gaccgtgatgatttcttcgtctttctccgtaccgccatcgatacatcggttgagcgattc
gagcacacgatgcaccctggcgctctcaccgatgtctacatcacggtcgatgcgctcgcc
aaactgattggaacctttgtcagcttgcagtttgacacatcatctacgcgagcgtcattt
gtcgactcgaccatggcgctaatcacactggtcctcaaccatcacagcgtcaagcgaggg
gagcaactgaaccaaagagtcttcttccgactactgtcgatgctcttacacgagatccac
gccatctcggaggacttttctgaagaggagcgccgcgacattttgctcaggatcgcctcc
cgacttgccggcatgggccctgctctcattcctggctttacctatggctggctctctctt
gttcagcaccgcgccttcatgccggtactcctccaactgcccgatggcgccggatgggga
ctgttcgtcgacctcgtgtgccagctctttgagtctcttggggatcaactgaaagtgttt
gaagtatccaacattgccaaggacatttaccgagccgcgttcaagcttctgatcatcctg
caacacgacttccccgatttcgtcgcggctaaccacgtcagaatctgcgccagcatcccg
ccgcactgcacacaattgatcaacgccgtgttggccgccaacccacagcagagtcccaag
tttgtcgagatgaatgccaaggatcgatccgacgagtccagggtccatcccggcctggtg
aacgaggccactgcaatcctccgagatgctggcctgctaggcgttgtcgaccaggccctc
cagagtggcccgtcagaggacattgtggctaacatcacgcactccatgacacacaacgct
cccaaggtgacaacatatggccatgtacctgttgcagtcaaccttgccgtcatcaatgcc
gtggtcatctacattgggcagcacgccgcggaccaggcagctcaggctggcacggctgtc
acagtatctggagacgagcatgaggtttcaactctgtccctcatcatccacgaactccct
gccgaggccagatactatcttttggtcagcgtggtgaaccagctacgcttccccaacgcg
cacaccgactttttcagccaggccctcctctatatcttcagcaaggacctggaggatccc
gaggagacggagatccgacagggaatcacgcgggtcctcctggagcggctggttagtttc
tggccgcagccatggggcctgctgtttacggttgtggagattgtcaagtgcgacaagtac
aatttctttgagctcccttttattaaggcgattcctgaggttgctgagaagtttggccag
gtggttcaacgaggttaa
DBGET
integrated database retrieval system
