Flavobacterium fluviale: HYN86_12880
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Entry
HYN86_12880 CDS
T07714
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ffl
Flavobacterium fluviale
Pathway
ffl00040
Pentose and glucuronate interconversions
ffl01100
Metabolic pathways
ffl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ffl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HYN86_12880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HYN86_12880
Enzymes [BR:
ffl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HYN86_12880
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GFIT
Motif
Pfam:
Pectate_lyase_4
Por_Secre_tail
Motif
Other DBs
NCBI-ProteinID:
AXB57440
UniProt:
A0A344LU48
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Position
complement(2919313..2920629)
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AA seq
438 aa
AA seq
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MKTKFLLLAFLLPYSFLFAQNYYMSSPEGFGASATGGGSVSPVTVSTYADLTAKLKLTTQ
QVILVSGTINCSYTSLLVNDKTIIGLPGARLVNLDQTSSGSGIFNLKPGSNNIIIRNLIF
EGPGAYDVDGHDNLTSEATNMWVDHCEFQDGMDGNFDNKGTADNVTVSWCKFTYLKTPKA
GGSGGADDHRFTNLVGSSKTDAPADGHYSITFKNCYWAEGCRERMPRARNAELHILNCYY
NTSVSGALAIGLGGGNNNTTCYVEGTDFAKIGTAFKNYVSTDGGTIGVAFTDCLNAPASS
GTAVTKPSYTYSTLPIANVAGFVSNSSCGAGATLQVTAQGALSTSCNNLGLNETTNNLEL
KYYPSVINRLLNIDFSSADNGLAQVDLFSSNGAKVYSKSKNISADEKLELNVGNLAKGFY
ICKVQIENRSKTFKLVKN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaatttttactattggcatttttactgccttactccttccttttcgctcaa
aattactacatgagttcgcccgaaggatttggagcgtctgcgacaggcggaggaagtgtt
tctcctgtaacagtttctacctatgctgatttaacagctaaattaaaattaaccactcag
caggtaatattggtctcgggaactattaattgctcctatacaagtttgttagtaaatgat
aaaaccattattggactcccaggagcccgattagtaaatttggatcaaacatcctcaggg
tctggaatttttaatttgaaaccagggtctaacaatatcattattagaaatttaattttt
gaaggaccaggtgcttacgatgtagacggacatgataatttaacctcagaagctacaaat
atgtgggttgatcactgtgaatttcaagatggaatggatggcaactttgacaacaaaggt
acggccgataatgtgactgtttcctggtgtaagtttacgtatttaaaaactccaaaagct
ggcggatccggcggtgcagatgatcatagatttacaaatctggtaggctcttctaaaaca
gatgctcctgccgatggtcattacagcattactttcaaaaattgttattgggcagaagga
tgcagagaaagaatgccaagagccagaaatgcagaattacatattttaaactgctattac
aatacttctgtttctggggcgcttgcaattggtttgggcggtggaaacaataatacaact
tgttatgttgaaggaactgattttgcaaaaattggaactgcctttaaaaattatgttagt
acggatggcggtacaattggcgttgcttttacagattgtttaaacgctcctgcaagttca
ggaactgctgtaactaaaccttcttacacttacagtactttaccaatagcaaatgttgca
ggattcgtttcgaattcttcttgtggtgctggagcaacacttcaagttactgctcaaggc
gctttatctacaagctgcaataatttaggattgaatgaaaccacaaataacttagaacta
aaatattatccatcagttataaatcgccttttaaatatagatttttcgagtgcagataat
ggtttggctcaggtcgatcttttttcttcaaacggtgcaaaagtatattcgaagtcaaaa
aatatttctgctgatgaaaaattagaattaaatgtcggcaatcttgcgaaaggattttat
atctgtaaagtacaaatagaaaaccgtagtaaaacttttaaactggtaaaaaactaa
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