Fulvia fulva: CLAFUR5_00457
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Entry
CLAFUR5_00457 CDS
T08195
Name
(RefSeq) Exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ffu
Fulvia fulva
Pathway
ffu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ffu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAFUR5_00457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ffu03019
]
CLAFUR5_00457
Messenger RNA biogenesis [BR:
ffu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CLAFUR5_00457
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CLAFUR5_00457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
ACC_epsilon
Motif
Other DBs
NCBI-GeneID:
71980335
NCBI-ProteinID:
XP_047757187
LinkDB
All DBs
Position
1:join(1904990..1905502,1905610..1906194)
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AA seq
365 aa
AA seq
DB search
MAPYTNIPLSPAELSYLHHSLSQTPPIRPDGRAPTQFRPLVAETEILPSANGSARICFAD
GTEAIVGVKMEVEKTVLVGRGGLHVQREQERGERRVDGDVDMDGDGEYEEGRGEGRDEWL
EVAIEIPGMRDDDALPVFLAAMLTEAMLADGSGVRDRLWINGRFHWRLFVDILLLSQPLS
YPLPLLSLTTHLALLSTRIPALISERDEDPIFNDDWEASTYLFPRDDASGKSTTKPPITL
LVMTAGSNILFDPSKEELAVADAVVAISAAAQGQDRQMKMVALRTVDPPSRLTAAGVPNR
ADTTAGGGMSAEETLKLREKDAGQSVWRPPRGGVSRTLLAQMIKAVVERGGVGREVMEGL
NAVET
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcaccctacaccaacatccccctctcccccgccgaactgtcctacctccaccactcc
ctctcccaaacaccacccatccgccccgacggccgcgctcccacacaattccgccctcta
gtcgccgagacagaaattctgccgagcgctaatggctcggcgaggatttgctttgcggat
gggacggaggcgattgtgggggtgaagatggaggttgagaagaccgtcttggtgggaaga
ggtggtttgcatgtgcagagggagcaggagcggggagagaggagggttgatggggatgtg
gatatggatggtgatggggagtatgaggaggggagaggagagggaagggacgagtggttg
gaggttgcgattgagattcccggtatgagagatgacgatgcgttgcctgtgttcctggct
gcgatgcttacggaggctatgctggcggatgggagtggtgtcagggataggttgtggatc
aatgggaggtttcactggaggttgtttgttgatattctccttctctcgcagccgctctcg
taccctctccctctcttgtccttaacgacacacctcgcgctcctgtcgacacgcatcccc
gcgctcatctcagaacgcgacgaagaccccatcttcaacgacgactgggaagcttcaacc
tacctcttcccccgagacgacgcgagtgggaaatccaccacgaaacctcccatcacctta
ctagtgatgacagcaggctccaacatcctcttcgaccccagcaaagaagagctagcagta
gccgacgcagtagtcgcaatatcagcagcagcacagggacaggatagacagatgaagatg
gtggcgctcaggacggtcgatccaccctcgaggttgacggccgcgggtgtgccgaatcga
gcggatactacggctgggggtgggatgtctgcggaggagacgttgaagctgagggagaag
gatgctgggcagagtgtttggaggccaccgcgtggtggcgtgagtagaacgctgctggcg
cagatgattaaggcggtggttgagcggggtggtgttgggcgggaggttatggaggggttg
aatgctgtggagacttga
DBGET
integrated database retrieval system
